Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00588Q9Y4M8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00588Q9Y4M8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00588Q9Y4M8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00588Q9Y4M8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00588Q9Y4M8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00588Q9Y4M8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00588Q9Y4M8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC14.1□□□□□ -0.15
LINC00588Q9Y4M8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 POU5F1P3-201ENST00000428824 1078 ntBASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 AC105020.6-201ENST00000621523 1217 ntBASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 PKD1P6-201ENST00000343738 4769 ntBASIC14.09□□□□□ -0.15
LINC00588Q9Y4M8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
LINC00588Q9Y4M8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LINC00588Q9Y4M8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
LINC00588Q9Y4M8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.08□□□□□ -0.15
LINC00588Q9Y4M8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC00588Q9Y4M8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms