Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AL109923.1-201ENST00000618799 583 ntBASIC18.81■□□□□ 0.6
RPH3AQ9Y2J0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPH3AQ9Y2J0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.81■□□□□ 0.6
RPH3AQ9Y2J0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RPH3AQ9Y2J0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RPH3AQ9Y2J0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPH3AQ9Y2J0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 AL137060.1-201ENST00000618151 2648 ntBASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 AC091799.1-201ENST00000422823 811 ntBASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPH3AQ9Y2J0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPH3AQ9Y2J0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RPH3AQ9Y2J0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.79■□□□□ 0.6
RPH3AQ9Y2J0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.79■□□□□ 0.6
RPH3AQ9Y2J0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
RPH3AQ9Y2J0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.79■□□□□ 0.6
RPH3AQ9Y2J0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.79■□□□□ 0.6
RPH3AQ9Y2J0 AC008694.1-202ENST00000636953 945 ntBASIC18.79■□□□□ 0.6
RPH3AQ9Y2J0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPH3AQ9Y2J0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPH3AQ9Y2J0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.79■□□□□ 0.6
RPH3AQ9Y2J0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.79■□□□□ 0.6
RPH3AQ9Y2J0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPH3AQ9Y2J0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPH3AQ9Y2J0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
RPH3AQ9Y2J0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.79■□□□□ 0.6
RPH3AQ9Y2J0 AL121603.2-201ENST00000557373 2117 ntBASIC18.79■□□□□ 0.6
RPH3AQ9Y2J0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPH3AQ9Y2J0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 CD99P1-205ENST00000527459 561 ntBASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPH3AQ9Y2J0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 AC083906.2-201ENST00000511578 360 ntBASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 AC105036.2-201ENST00000569468 176 ntBASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 AC069236.1-201ENST00000604339 616 ntBASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 AC016405.3-201ENST00000607710 860 ntBASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 AL121832.2-201ENST00000610979 668 ntBASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.77■□□□□ 0.6
RPH3AQ9Y2J0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RPH3AQ9Y2J0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPH3AQ9Y2J0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPH3AQ9Y2J0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPH3AQ9Y2J0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPH3AQ9Y2J0 GPX1P1-201ENST00000388829 606 ntBASIC18.76■□□□□ 0.59
RPH3AQ9Y2J0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPH3AQ9Y2J0 NCF1B-203ENST00000435988 1254 ntBASIC18.76■□□□□ 0.59
RPH3AQ9Y2J0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms