Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HHLA3Q9XRX5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HHLA3Q9XRX5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HHLA3Q9XRX5 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.99□□□□□ -0.01
HHLA3Q9XRX5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HHLA3Q9XRX5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.99□□□□□ -0.01
HHLA3Q9XRX5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HHLA3Q9XRX5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.99□□□□□ -0.01
HHLA3Q9XRX5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HHLA3Q9XRX5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HHLA3Q9XRX5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
HHLA3Q9XRX5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HHLA3Q9XRX5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
HHLA3Q9XRX5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 MIR6084-201ENST00000622012 110 ntBASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 AC018445.3-201ENST00000624177 1945 ntBASIC14.98□□□□□ -0.01
HHLA3Q9XRX5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 AC073314.1-201ENST00000568729 2216 ntBASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 SMG8-203ENST00000578922 2178 ntBASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.97□□□□□ -0.01
HHLA3Q9XRX5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.96□□□□□ -0.01
HHLA3Q9XRX5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.96□□□□□ -0.02
HHLA3Q9XRX5 AC055733.4-201ENST00000638462 1354 ntBASIC14.96□□□□□ -0.02
HHLA3Q9XRX5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HHLA3Q9XRX5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HHLA3Q9XRX5 BX323043.1-201ENST00000641006 1765 ntBASIC14.96□□□□□ -0.02
HHLA3Q9XRX5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.95□□□□□ -0.02
HHLA3Q9XRX5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms