Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 SUDS3P1-201ENST00000505831 966 ntBASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHMP2BQ9UQN3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHMP2BQ9UQN3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.89■□□□□ 0.94
CHMP2BQ9UQN3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CHMP2BQ9UQN3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP2BQ9UQN3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 AC079140.4-201ENST00000507448 529 ntBASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 AC008175.2-201ENST00000612840 297 ntBASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2BQ9UQN3 AL162377.1-201ENST00000618844 1793 ntBASIC20.87■□□□□ 0.93
CHMP2BQ9UQN3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CHMP2BQ9UQN3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.87■□□□□ 0.93
CHMP2BQ9UQN3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2BQ9UQN3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2BQ9UQN3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2BQ9UQN3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
CHMP2BQ9UQN3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2BQ9UQN3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2BQ9UQN3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
CHMP2BQ9UQN3 KRT87P-202ENST00000534226 1464 ntBASIC20.87■□□□□ 0.93
CHMP2BQ9UQN3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.87■□□□□ 0.93
CHMP2BQ9UQN3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.87■□□□□ 0.93
CHMP2BQ9UQN3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
CHMP2BQ9UQN3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.87■□□□□ 0.93
CHMP2BQ9UQN3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2BQ9UQN3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2BQ9UQN3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2BQ9UQN3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2BQ9UQN3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2BQ9UQN3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2BQ9UQN3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2BQ9UQN3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2BQ9UQN3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.86■□□□□ 0.93
CHMP2BQ9UQN3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2BQ9UQN3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CHMP2BQ9UQN3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CHMP2BQ9UQN3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2BQ9UQN3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 POU5F1P4-201ENST00000413175 1085 ntBASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms