Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SPG7Q9UQ90 GOLGA2P6-201ENST00000340929 2049 ntBASIC27■■□□□ 1.91
SPG7Q9UQ90 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SPG7Q9UQ90 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
SPG7Q9UQ90 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC27■■□□□ 1.91
SPG7Q9UQ90 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SPG7Q9UQ90 GGT1-206ENST00000404223 952 ntTSL 2 BASIC27■■□□□ 1.91
SPG7Q9UQ90 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
SPG7Q9UQ90 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC27■■□□□ 1.91
SPG7Q9UQ90 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC27■■□□□ 1.91
SPG7Q9UQ90 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SPG7Q9UQ90 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SPG7Q9UQ90 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
SPG7Q9UQ90 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC27■■□□□ 1.91
SPG7Q9UQ90 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SPG7Q9UQ90 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC27■■□□□ 1.91
SPG7Q9UQ90 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
SPG7Q9UQ90 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC27■■□□□ 1.91
SPG7Q9UQ90 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SPG7Q9UQ90 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
SPG7Q9UQ90 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SPG7Q9UQ90 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SPG7Q9UQ90 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SPG7Q9UQ90 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.99■■□□□ 1.91
SPG7Q9UQ90 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SPG7Q9UQ90 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SPG7Q9UQ90 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SPG7Q9UQ90 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SPG7Q9UQ90 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SPG7Q9UQ90 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.99■■□□□ 1.91
SPG7Q9UQ90 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
SPG7Q9UQ90 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SPG7Q9UQ90 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.99■■□□□ 1.91
SPG7Q9UQ90 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 ISG20-202ENST00000379224 540 ntTSL 3 BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC26.98■■□□□ 1.91
SPG7Q9UQ90 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SPG7Q9UQ90 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
SPG7Q9UQ90 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SPG7Q9UQ90 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SPG7Q9UQ90 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SPG7Q9UQ90 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
SPG7Q9UQ90 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC26.97■■□□□ 1.91
SPG7Q9UQ90 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC26.97■■□□□ 1.91
SPG7Q9UQ90 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SPG7Q9UQ90 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC26.97■■□□□ 1.91
SPG7Q9UQ90 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SPG7Q9UQ90 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SPG7Q9UQ90 TERT-206ENST00000508104 2486 ntTSL 5 BASIC26.97■■□□□ 1.91
SPG7Q9UQ90 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC26.97■■□□□ 1.91
SPG7Q9UQ90 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.96■■□□□ 1.91
SPG7Q9UQ90 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SPG7Q9UQ90 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC26.96■■□□□ 1.91
SPG7Q9UQ90 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.96■■□□□ 1.91
SPG7Q9UQ90 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC26.96■■□□□ 1.91
SPG7Q9UQ90 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC26.96■■□□□ 1.91
SPG7Q9UQ90 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC26.96■■□□□ 1.91
SPG7Q9UQ90 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SPG7Q9UQ90 MTDHP1-201ENST00000605323 784 ntBASIC26.96■■□□□ 1.91
SPG7Q9UQ90 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SPG7Q9UQ90 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
SPG7Q9UQ90 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
SPG7Q9UQ90 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SPG7Q9UQ90 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SPG7Q9UQ90 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SPG7Q9UQ90 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SPG7Q9UQ90 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC26.96■■□□□ 1.91
SPG7Q9UQ90 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SPG7Q9UQ90 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SPG7Q9UQ90 AC005829.2-201ENST00000571422 1056 ntBASIC26.95■■□□□ 1.9
SPG7Q9UQ90 AC120498.8-201ENST00000614275 531 ntBASIC26.95■■□□□ 1.9
SPG7Q9UQ90 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SPG7Q9UQ90 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SPG7Q9UQ90 EXOC3-AS1-202ENST00000623673 1663 ntBASIC26.95■■□□□ 1.9
SPG7Q9UQ90 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SPG7Q9UQ90 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SPG7Q9UQ90 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
SPG7Q9UQ90 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC26.94■■□□□ 1.9
SPG7Q9UQ90 SNORA78-201ENST00000459373 127 ntBASIC26.94■■□□□ 1.9
SPG7Q9UQ90 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
SPG7Q9UQ90 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC26.94■■□□□ 1.9
SPG7Q9UQ90 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC26.94■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms