Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 PLK5-205ENST00000642079 1969 ntBASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.99
PRDM4Q9UKN5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.2■□□□□ 0.99
PRDM4Q9UKN5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
PRDM4Q9UKN5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRDM4Q9UKN5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRDM4Q9UKN5 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PRDM4Q9UKN5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRDM4Q9UKN5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC21.2■□□□□ 0.98
PRDM4Q9UKN5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.2■□□□□ 0.98
PRDM4Q9UKN5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.2■□□□□ 0.98
PRDM4Q9UKN5 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRDM4Q9UKN5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRDM4Q9UKN5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PRDM4Q9UKN5 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRDM4Q9UKN5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
PRDM4Q9UKN5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRDM4Q9UKN5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PRDM4Q9UKN5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRDM4Q9UKN5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRDM4Q9UKN5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRDM4Q9UKN5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.2■□□□□ 0.98
PRDM4Q9UKN5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRDM4Q9UKN5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRDM4Q9UKN5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRDM4Q9UKN5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.19■□□□□ 0.98
PRDM4Q9UKN5 AC027702.1-201ENST00000563810 1770 ntBASIC21.19■□□□□ 0.98
PRDM4Q9UKN5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRDM4Q9UKN5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRDM4Q9UKN5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRDM4Q9UKN5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.19■□□□□ 0.98
PRDM4Q9UKN5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRDM4Q9UKN5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.19■□□□□ 0.98
PRDM4Q9UKN5 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRDM4Q9UKN5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PRDM4Q9UKN5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRDM4Q9UKN5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 AL162377.1-201ENST00000618844 1793 ntBASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 KRT18P24-201ENST00000344739 1156 ntBASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRDM4Q9UKN5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PRDM4Q9UKN5 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 AC099778.1-201ENST00000568593 1911 ntBASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms