Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
RIMBP3Q9UFD9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC33.29■■■□□ 2.92
RIMBP3Q9UFD9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
RIMBP3Q9UFD9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC33.29■■■□□ 2.92
RIMBP3Q9UFD9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC33.29■■■□□ 2.92
RIMBP3Q9UFD9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC33.29■■■□□ 2.92
RIMBP3Q9UFD9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC33.28■■■□□ 2.92
RIMBP3Q9UFD9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC33.28■■■□□ 2.92
RIMBP3Q9UFD9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC33.28■■■□□ 2.92
RIMBP3Q9UFD9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC33.28■■■□□ 2.92
RIMBP3Q9UFD9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC33.28■■■□□ 2.92
RIMBP3Q9UFD9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC33.28■■■□□ 2.92
RIMBP3Q9UFD9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC33.28■■■□□ 2.92
RIMBP3Q9UFD9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC33.28■■■□□ 2.92
RIMBP3Q9UFD9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
RIMBP3Q9UFD9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
RIMBP3Q9UFD9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
RIMBP3Q9UFD9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
RIMBP3Q9UFD9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC33.27■■■□□ 2.92
RIMBP3Q9UFD9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
RIMBP3Q9UFD9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
RIMBP3Q9UFD9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC33.27■■■□□ 2.92
RIMBP3Q9UFD9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC33.27■■■□□ 2.92
RIMBP3Q9UFD9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC33.27■■■□□ 2.92
RIMBP3Q9UFD9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC33.27■■■□□ 2.92
RIMBP3Q9UFD9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC33.27■■■□□ 2.92
RIMBP3Q9UFD9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC33.27■■■□□ 2.92
RIMBP3Q9UFD9 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
RIMBP3Q9UFD9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC33.26■■■□□ 2.92
RIMBP3Q9UFD9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
RIMBP3Q9UFD9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC33.26■■■□□ 2.91
RIMBP3Q9UFD9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
RIMBP3Q9UFD9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
RIMBP3Q9UFD9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
RIMBP3Q9UFD9 PCED1CP-201ENST00000419887 785 ntBASIC33.26■■■□□ 2.91
RIMBP3Q9UFD9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.91
RIMBP3Q9UFD9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC33.26■■■□□ 2.91
RIMBP3Q9UFD9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC33.26■■■□□ 2.91
RIMBP3Q9UFD9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
RIMBP3Q9UFD9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC33.26■■■□□ 2.91
RIMBP3Q9UFD9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC33.26■■■□□ 2.91
RIMBP3Q9UFD9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC33.25■■■□□ 2.91
RIMBP3Q9UFD9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC33.25■■■□□ 2.91
RIMBP3Q9UFD9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
RIMBP3Q9UFD9 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
RIMBP3Q9UFD9 FDX1P1-201ENST00000449115 551 ntBASIC33.24■■■□□ 2.91
RIMBP3Q9UFD9 ECEL1P2-202ENST00000465689 757 ntBASIC33.24■■■□□ 2.91
RIMBP3Q9UFD9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC33.24■■■□□ 2.91
RIMBP3Q9UFD9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC33.24■■■□□ 2.91
RIMBP3Q9UFD9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC33.24■■■□□ 2.91
RIMBP3Q9UFD9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
RIMBP3Q9UFD9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
RIMBP3Q9UFD9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC33.24■■■□□ 2.91
RIMBP3Q9UFD9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC33.24■■■□□ 2.91
RIMBP3Q9UFD9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC33.24■■■□□ 2.91
RIMBP3Q9UFD9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC33.24■■■□□ 2.91
RIMBP3Q9UFD9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC33.24■■■□□ 2.91
RIMBP3Q9UFD9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
RIMBP3Q9UFD9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
RIMBP3Q9UFD9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
RIMBP3Q9UFD9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
RIMBP3Q9UFD9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC33.23■■■□□ 2.91
RIMBP3Q9UFD9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC33.23■■■□□ 2.91
RIMBP3Q9UFD9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC33.23■■■□□ 2.91
RIMBP3Q9UFD9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC33.23■■■□□ 2.91
RIMBP3Q9UFD9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC33.23■■■□□ 2.91
RIMBP3Q9UFD9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
RIMBP3Q9UFD9 AC091390.4-202ENST00000476426 537 ntBASIC33.23■■■□□ 2.91
RIMBP3Q9UFD9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC33.23■■■□□ 2.91
RIMBP3Q9UFD9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC33.23■■■□□ 2.91
RIMBP3Q9UFD9 FAM86EP-206ENST00000510506 987 ntBASIC33.23■■■□□ 2.91
RIMBP3Q9UFD9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC33.23■■■□□ 2.91
RIMBP3Q9UFD9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
RIMBP3Q9UFD9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC33.22■■■□□ 2.91
RIMBP3Q9UFD9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
RIMBP3Q9UFD9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC33.22■■■□□ 2.91
RIMBP3Q9UFD9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
RIMBP3Q9UFD9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC33.22■■■□□ 2.91
RIMBP3Q9UFD9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC33.22■■■□□ 2.91
RIMBP3Q9UFD9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC33.22■■■□□ 2.91
RIMBP3Q9UFD9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC33.22■■■□□ 2.91
RIMBP3Q9UFD9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC33.22■■■□□ 2.91
RIMBP3Q9UFD9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC33.22■■■□□ 2.91
RIMBP3Q9UFD9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
RIMBP3Q9UFD9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
RIMBP3Q9UFD9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC33.21■■■□□ 2.91
RIMBP3Q9UFD9 AC128688.1-201ENST00000487626 519 ntBASIC33.21■■■□□ 2.91
RIMBP3Q9UFD9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC33.21■■■□□ 2.91
RIMBP3Q9UFD9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC33.21■■■□□ 2.91
RIMBP3Q9UFD9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC33.21■■■□□ 2.91
RIMBP3Q9UFD9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC33.21■■■□□ 2.91
RIMBP3Q9UFD9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC33.21■■■□□ 2.91
RIMBP3Q9UFD9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
RIMBP3Q9UFD9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC33.21■■■□□ 2.91
RIMBP3Q9UFD9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC33.2■■■□□ 2.91
RIMBP3Q9UFD9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC33.2■■■□□ 2.91
RIMBP3Q9UFD9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
RIMBP3Q9UFD9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
RIMBP3Q9UFD9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
RIMBP3Q9UFD9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms