Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
NCDNQ9UBB6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.48■□□□□ 0.87
NCDNQ9UBB6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.47■□□□□ 0.87
NCDNQ9UBB6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCDNQ9UBB6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCDNQ9UBB6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCDNQ9UBB6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCDNQ9UBB6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.47■□□□□ 0.87
NCDNQ9UBB6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.47■□□□□ 0.87
NCDNQ9UBB6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCDNQ9UBB6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.47■□□□□ 0.87
NCDNQ9UBB6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
NCDNQ9UBB6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCDNQ9UBB6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCDNQ9UBB6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCDNQ9UBB6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCDNQ9UBB6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.47■□□□□ 0.87
NCDNQ9UBB6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 C9orf163-202ENST00000624034 2573 ntBASIC20.46■□□□□ 0.87
NCDNQ9UBB6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NCDNQ9UBB6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 AC120498.8-201ENST00000614275 531 ntBASIC20.45■□□□□ 0.86
NCDNQ9UBB6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.45■□□□□ 0.86
NCDNQ9UBB6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NCDNQ9UBB6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.44■□□□□ 0.86
NCDNQ9UBB6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NCDNQ9UBB6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.44■□□□□ 0.86
NCDNQ9UBB6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
NCDNQ9UBB6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NCDNQ9UBB6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCDNQ9UBB6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.44■□□□□ 0.86
NCDNQ9UBB6 AC005521.1-201ENST00000393351 872 ntBASIC20.44■□□□□ 0.86
NCDNQ9UBB6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.44■□□□□ 0.86
NCDNQ9UBB6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NCDNQ9UBB6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NCDNQ9UBB6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.44■□□□□ 0.86
NCDNQ9UBB6 AC145285.6-201ENST00000604632 637 ntBASIC20.44■□□□□ 0.86
NCDNQ9UBB6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NCDNQ9UBB6 AC105020.6-201ENST00000621523 1217 ntBASIC20.44■□□□□ 0.86
NCDNQ9UBB6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCDNQ9UBB6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCDNQ9UBB6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCDNQ9UBB6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCDNQ9UBB6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCDNQ9UBB6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCDNQ9UBB6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCDNQ9UBB6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCDNQ9UBB6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NCDNQ9UBB6 AC007322.3-201ENST00000426526 701 ntBASIC20.43■□□□□ 0.86
NCDNQ9UBB6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.43■□□□□ 0.86
NCDNQ9UBB6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.43■□□□□ 0.86
NCDNQ9UBB6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.43■□□□□ 0.86
NCDNQ9UBB6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.43■□□□□ 0.86
NCDNQ9UBB6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.43■□□□□ 0.86
NCDNQ9UBB6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
NCDNQ9UBB6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NCDNQ9UBB6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.43■□□□□ 0.86
NCDNQ9UBB6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NCDNQ9UBB6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCDNQ9UBB6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCDNQ9UBB6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCDNQ9UBB6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCDNQ9UBB6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.42■□□□□ 0.86
NCDNQ9UBB6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms