Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
COL20A1Q9P218 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
COL20A1Q9P218 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL20A1Q9P218 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
COL20A1Q9P218 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
COL20A1Q9P218 AC066615.1-201ENST00000640911 628 ntBASIC23.4■■□□□ 1.34
COL20A1Q9P218 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.4■■□□□ 1.34
COL20A1Q9P218 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
COL20A1Q9P218 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
COL20A1Q9P218 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
COL20A1Q9P218 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
COL20A1Q9P218 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.39■■□□□ 1.34
COL20A1Q9P218 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.39■■□□□ 1.34
COL20A1Q9P218 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
COL20A1Q9P218 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
COL20A1Q9P218 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL20A1Q9P218 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL20A1Q9P218 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.39■■□□□ 1.33
COL20A1Q9P218 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.39■■□□□ 1.33
COL20A1Q9P218 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
COL20A1Q9P218 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.39■■□□□ 1.33
COL20A1Q9P218 AC060766.5-201ENST00000590539 871 ntBASIC23.39■■□□□ 1.33
COL20A1Q9P218 AC008403.3-201ENST00000598924 454 ntBASIC23.39■■□□□ 1.33
COL20A1Q9P218 HLA-B-256ENST00000639848 1089 ntBASIC23.39■■□□□ 1.33
COL20A1Q9P218 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.39■■□□□ 1.33
COL20A1Q9P218 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL20A1Q9P218 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL20A1Q9P218 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL20A1Q9P218 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL20A1Q9P218 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
COL20A1Q9P218 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL20A1Q9P218 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.38■■□□□ 1.33
COL20A1Q9P218 KRT18P29-201ENST00000397031 1267 ntBASIC23.38■■□□□ 1.33
COL20A1Q9P218 AC098590.1-201ENST00000468126 897 ntBASIC23.38■■□□□ 1.33
COL20A1Q9P218 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL20A1Q9P218 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL20A1Q9P218 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL20A1Q9P218 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL20A1Q9P218 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL20A1Q9P218 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL20A1Q9P218 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL20A1Q9P218 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL20A1Q9P218 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL20A1Q9P218 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL20A1Q9P218 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL20A1Q9P218 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL20A1Q9P218 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.37■■□□□ 1.33
COL20A1Q9P218 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.37■■□□□ 1.33
COL20A1Q9P218 AC026366.1-201ENST00000488803 879 ntBASIC23.37■■□□□ 1.33
COL20A1Q9P218 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
COL20A1Q9P218 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL20A1Q9P218 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL20A1Q9P218 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL20A1Q9P218 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL20A1Q9P218 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.36■■□□□ 1.33
COL20A1Q9P218 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.36■■□□□ 1.33
COL20A1Q9P218 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.36■■□□□ 1.33
COL20A1Q9P218 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
COL20A1Q9P218 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
COL20A1Q9P218 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL20A1Q9P218 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.36■■□□□ 1.33
COL20A1Q9P218 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL20A1Q9P218 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.36■■□□□ 1.33
COL20A1Q9P218 AC006058.3-201ENST00000606217 1069 ntBASIC23.36■■□□□ 1.33
COL20A1Q9P218 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.36■■□□□ 1.33
COL20A1Q9P218 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL20A1Q9P218 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL20A1Q9P218 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL20A1Q9P218 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL20A1Q9P218 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.35■■□□□ 1.33
COL20A1Q9P218 AC011484.1-201ENST00000377652 1995 ntBASIC23.35■■□□□ 1.33
COL20A1Q9P218 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.35■■□□□ 1.33
COL20A1Q9P218 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.35■■□□□ 1.33
COL20A1Q9P218 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL20A1Q9P218 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL20A1Q9P218 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL20A1Q9P218 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.35■■□□□ 1.33
COL20A1Q9P218 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.35■■□□□ 1.33
COL20A1Q9P218 AP003097.1-201ENST00000530657 1135 ntBASIC23.35■■□□□ 1.33
COL20A1Q9P218 PNMA6B-201ENST00000538162 1200 ntBASIC23.35■■□□□ 1.33
COL20A1Q9P218 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL20A1Q9P218 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL20A1Q9P218 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.35■■□□□ 1.33
COL20A1Q9P218 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.34■■□□□ 1.33
COL20A1Q9P218 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.34■■□□□ 1.33
COL20A1Q9P218 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
COL20A1Q9P218 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL20A1Q9P218 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL20A1Q9P218 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL20A1Q9P218 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL20A1Q9P218 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL20A1Q9P218 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.34■■□□□ 1.33
COL20A1Q9P218 AC128676.1-201ENST00000454392 318 ntBASIC23.34■■□□□ 1.33
COL20A1Q9P218 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.34■■□□□ 1.33
COL20A1Q9P218 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.34■■□□□ 1.33
COL20A1Q9P218 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL20A1Q9P218 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL20A1Q9P218 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.34■■□□□ 1.33
COL20A1Q9P218 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL20A1Q9P218 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms