Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCMF1Q9P0J7 AC006128.1-201ENST00000624704 1661 ntBASIC19.48■□□□□ 0.71
KCMF1Q9P0J7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KCMF1Q9P0J7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KCMF1Q9P0J7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.48■□□□□ 0.71
KCMF1Q9P0J7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCMF1Q9P0J7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 AC016405.3-201ENST00000607710 860 ntBASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.47■□□□□ 0.71
KCMF1Q9P0J7 AL121603.2-201ENST00000557373 2117 ntBASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 CDV3P1-201ENST00000471403 739 ntBASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCMF1Q9P0J7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KCMF1Q9P0J7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KCMF1Q9P0J7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.45■□□□□ 0.7
KCMF1Q9P0J7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.45■□□□□ 0.7
KCMF1Q9P0J7 AC026185.1-201ENST00000445748 174 ntBASIC19.45■□□□□ 0.7
KCMF1Q9P0J7 FAM21FP-204ENST00000608637 956 ntBASIC19.45■□□□□ 0.7
KCMF1Q9P0J7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
KCMF1Q9P0J7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KCMF1Q9P0J7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KCMF1Q9P0J7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.45■□□□□ 0.7
KCMF1Q9P0J7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCMF1Q9P0J7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 AC027702.1-201ENST00000563810 1770 ntBASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms