Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC23.35■■□□□ 1.33
RNF216Q9NWF9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF216Q9NWF9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF216Q9NWF9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 DUX4L16-201ENST00000555130 1264 ntBASIC23.34■■□□□ 1.33
RNF216Q9NWF9 AC138907.5-202ENST00000569484 235 ntBASIC23.34■■□□□ 1.33
RNF216Q9NWF9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 AC063950.1-202ENST00000600133 568 ntBASIC23.34■■□□□ 1.33
RNF216Q9NWF9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF216Q9NWF9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF216Q9NWF9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF216Q9NWF9 AC026310.3-201ENST00000625186 2373 ntBASIC23.33■■□□□ 1.33
RNF216Q9NWF9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.33■■□□□ 1.33
RNF216Q9NWF9 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF216Q9NWF9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.33■■□□□ 1.33
RNF216Q9NWF9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF216Q9NWF9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.33■■□□□ 1.33
RNF216Q9NWF9 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RNF216Q9NWF9 AC019227.1-201ENST00000526902 510 ntBASIC23.33■■□□□ 1.33
RNF216Q9NWF9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.33■■□□□ 1.33
RNF216Q9NWF9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.33■■□□□ 1.33
RNF216Q9NWF9 AC104072.1-201ENST00000568817 668 ntBASIC23.33■■□□□ 1.33
RNF216Q9NWF9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.33■■□□□ 1.33
RNF216Q9NWF9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.33■■□□□ 1.33
RNF216Q9NWF9 AC005181.1-201ENST00000604782 1256 ntBASIC23.33■■□□□ 1.33
RNF216Q9NWF9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.33■■□□□ 1.33
RNF216Q9NWF9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF216Q9NWF9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
RNF216Q9NWF9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RNF216Q9NWF9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
RNF216Q9NWF9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RNF216Q9NWF9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.32
RNF216Q9NWF9 OR7E47P-201ENST00000546390 1422 ntBASIC23.33■■□□□ 1.32
RNF216Q9NWF9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF216Q9NWF9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
RNF216Q9NWF9 AP004607.7-201ENST00000527152 1677 ntBASIC23.32■■□□□ 1.32
RNF216Q9NWF9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF216Q9NWF9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RNF216Q9NWF9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF216Q9NWF9 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC23.32■■□□□ 1.32
RNF216Q9NWF9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
RNF216Q9NWF9 AC083906.2-201ENST00000511578 360 ntBASIC23.32■■□□□ 1.32
RNF216Q9NWF9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.32■■□□□ 1.32
RNF216Q9NWF9 AC090953.1-201ENST00000604305 1092 ntBASIC23.32■■□□□ 1.32
RNF216Q9NWF9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.32■■□□□ 1.32
RNF216Q9NWF9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF216Q9NWF9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
RNF216Q9NWF9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RNF216Q9NWF9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.31■■□□□ 1.32
RNF216Q9NWF9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RNF216Q9NWF9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
RNF216Q9NWF9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RNF216Q9NWF9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.31■■□□□ 1.32
RNF216Q9NWF9 AC010141.2-201ENST00000452426 721 ntBASIC23.31■■□□□ 1.32
RNF216Q9NWF9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.31■■□□□ 1.32
RNF216Q9NWF9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
RNF216Q9NWF9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
RNF216Q9NWF9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF216Q9NWF9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 SLC29A4P1-201ENST00000398760 971 ntBASIC23.3■■□□□ 1.32
RNF216Q9NWF9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 SLC7A5P1-201ENST00000568957 537 ntBASIC23.3■■□□□ 1.32
RNF216Q9NWF9 AC142086.2-201ENST00000569753 217 ntBASIC23.3■■□□□ 1.32
RNF216Q9NWF9 AC109809.1-201ENST00000619665 545 ntBASIC23.3■■□□□ 1.32
RNF216Q9NWF9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
RNF216Q9NWF9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms