Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 AC121338.2-201ENST00000622535 1744 ntBASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 OR10C1-204ENST00000622521 1039 ntBASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SDHAF3Q9NRP4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SDHAF3Q9NRP4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SDHAF3Q9NRP4 AC007375.3-201ENST00000600936 2314 ntBASIC18.85■□□□□ 0.61
SDHAF3Q9NRP4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SDHAF3Q9NRP4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SDHAF3Q9NRP4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.85■□□□□ 0.61
SDHAF3Q9NRP4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SDHAF3Q9NRP4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SDHAF3Q9NRP4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SDHAF3Q9NRP4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SDHAF3Q9NRP4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.85■□□□□ 0.61
SDHAF3Q9NRP4 AC006970.2-201ENST00000450065 779 ntBASIC18.85■□□□□ 0.61
SDHAF3Q9NRP4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.85■□□□□ 0.61
SDHAF3Q9NRP4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SDHAF3Q9NRP4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SDHAF3Q9NRP4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.85■□□□□ 0.61
SDHAF3Q9NRP4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SDHAF3Q9NRP4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 RAP2CP1-201ENST00000605103 478 ntBASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAF3Q9NRP4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SDHAF3Q9NRP4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.83■□□□□ 0.61
SDHAF3Q9NRP4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SDHAF3Q9NRP4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.83■□□□□ 0.61
SDHAF3Q9NRP4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SDHAF3Q9NRP4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SDHAF3Q9NRP4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
SDHAF3Q9NRP4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.83■□□□□ 0.6
SDHAF3Q9NRP4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.83■□□□□ 0.6
SDHAF3Q9NRP4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.83■□□□□ 0.6
SDHAF3Q9NRP4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SDHAF3Q9NRP4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SDHAF3Q9NRP4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.83■□□□□ 0.6
SDHAF3Q9NRP4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SDHAF3Q9NRP4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SDHAF3Q9NRP4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.83■□□□□ 0.6
SDHAF3Q9NRP4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 CYP2T1P-201ENST00000432607 1285 ntBASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 RARRES2P4-201ENST00000514074 484 ntBASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 AC090192.1-201ENST00000517740 490 ntBASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 AC133552.2-202ENST00000575694 574 ntBASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms