Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB16Q9NRJ7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB16Q9NRJ7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB16Q9NRJ7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB16Q9NRJ7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCDHB16Q9NRJ7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB16Q9NRJ7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB16Q9NRJ7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB16Q9NRJ7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCDHB16Q9NRJ7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB16Q9NRJ7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDHB16Q9NRJ7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
PCDHB16Q9NRJ7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 AC099791.1-201ENST00000416440 715 ntBASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 AC121338.2-201ENST00000622535 1744 ntBASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB16Q9NRJ7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PCDHB16Q9NRJ7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB16Q9NRJ7 AC087289.5-201ENST00000586076 3175 ntBASIC17.77■□□□□ 0.44
PCDHB16Q9NRJ7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHB16Q9NRJ7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB16Q9NRJ7 TSPY26P-201ENST00000476365 1326 ntBASIC17.77■□□□□ 0.44
PCDHB16Q9NRJ7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB16Q9NRJ7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PCDHB16Q9NRJ7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHB16Q9NRJ7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB16Q9NRJ7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB16Q9NRJ7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHB16Q9NRJ7 AC110285.6-201ENST00000617652 491 ntBASIC17.77■□□□□ 0.44
PCDHB16Q9NRJ7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.77■□□□□ 0.44
PCDHB16Q9NRJ7 HCG11-201ENST00000411553 5696 ntBASIC17.77■□□□□ 0.44
PCDHB16Q9NRJ7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB16Q9NRJ7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB16Q9NRJ7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.77■□□□□ 0.43
PCDHB16Q9NRJ7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHB16Q9NRJ7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHB16Q9NRJ7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHB16Q9NRJ7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.77■□□□□ 0.43
PCDHB16Q9NRJ7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHB16Q9NRJ7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 AL355001.2-201ENST00000620617 1191 ntBASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHB16Q9NRJ7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHB16Q9NRJ7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB16Q9NRJ7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
PCDHB16Q9NRJ7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB16Q9NRJ7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB16Q9NRJ7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PCDHB16Q9NRJ7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB16Q9NRJ7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB16Q9NRJ7 MIR572-201ENST00000384983 95 ntBASIC17.75■□□□□ 0.43
PCDHB16Q9NRJ7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHB16Q9NRJ7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHB16Q9NRJ7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHB16Q9NRJ7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
PCDHB16Q9NRJ7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB16Q9NRJ7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB16Q9NRJ7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHB16Q9NRJ7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHB16Q9NRJ7 FEM1AP1-201ENST00000431297 1995 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms