Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CTPS2Q9NRF8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTPS2Q9NRF8 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.08■□□□□ 0.64
CTPS2Q9NRF8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.08■□□□□ 0.64
CTPS2Q9NRF8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.08■□□□□ 0.64
CTPS2Q9NRF8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.08■□□□□ 0.64
CTPS2Q9NRF8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.08■□□□□ 0.64
CTPS2Q9NRF8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.08■□□□□ 0.64
CTPS2Q9NRF8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTPS2Q9NRF8 MIR6821-201ENST00000617625 74 ntBASIC19.08■□□□□ 0.64
CTPS2Q9NRF8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTPS2Q9NRF8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CTPS2Q9NRF8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CTPS2Q9NRF8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTPS2Q9NRF8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTPS2Q9NRF8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CTPS2Q9NRF8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
CTPS2Q9NRF8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 AP005212.1-201ENST00000581547 1997 ntBASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 DUX4L2-201ENST00000561772 1275 ntBASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 DUX4L6-201ENST00000626483 1275 ntBASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 DUX4L1-201ENST00000627662 1275 ntBASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 DUX4L8-201ENST00000629013 1275 ntBASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 DUX4L3-201ENST00000630187 1275 ntBASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 DUX4L7-201ENST00000630678 1275 ntBASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 DUX4L5-201ENST00000630834 1275 ntBASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTPS2Q9NRF8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 AC027702.1-201ENST00000563810 1770 ntBASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 FP700111.2-201ENST00000619190 1892 ntBASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 AC087623.3-201ENST00000607047 1098 ntBASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.06■□□□□ 0.64
CTPS2Q9NRF8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 AC104187.1-201ENST00000607510 612 ntBASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 AC004854.2-201ENST00000608450 1441 ntBASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTPS2Q9NRF8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 AC034268.1-201ENST00000441047 882 ntBASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms