Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 OR10C1-204ENST00000622521 1039 ntBASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 PLK5-205ENST00000642079 1969 ntBASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRDM9Q9NQV7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRDM9Q9NQV7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRDM9Q9NQV7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRDM9Q9NQV7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.43■□□□□ 0.7
PRDM9Q9NQV7 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.43■□□□□ 0.7
PRDM9Q9NQV7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.43■□□□□ 0.7
PRDM9Q9NQV7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.43■□□□□ 0.7
PRDM9Q9NQV7 AL121832.2-201ENST00000610979 668 ntBASIC19.43■□□□□ 0.7
PRDM9Q9NQV7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRDM9Q9NQV7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PRDM9Q9NQV7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.43■□□□□ 0.7
PRDM9Q9NQV7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRDM9Q9NQV7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRDM9Q9NQV7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRDM9Q9NQV7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PRDM9Q9NQV7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRDM9Q9NQV7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRDM9Q9NQV7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRDM9Q9NQV7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRDM9Q9NQV7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PRDM9Q9NQV7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRDM9Q9NQV7 AC007322.3-201ENST00000426526 701 ntBASIC19.42■□□□□ 0.7
PRDM9Q9NQV7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.42■□□□□ 0.7
PRDM9Q9NQV7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PRDM9Q9NQV7 AC016405.3-201ENST00000607710 860 ntBASIC19.42■□□□□ 0.7
PRDM9Q9NQV7 FAM21FP-204ENST00000608637 956 ntBASIC19.42■□□□□ 0.7
PRDM9Q9NQV7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRDM9Q9NQV7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRDM9Q9NQV7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRDM9Q9NQV7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 ID1-201ENST00000376105 1233 ntBASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 GPX1P1-201ENST00000388829 606 ntBASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 AC083906.2-201ENST00000511578 360 ntBASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 RARRES2P4-201ENST00000514074 484 ntBASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 AF201337.1-201ENST00000520239 748 ntBASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRDM9Q9NQV7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 AC027702.1-201ENST00000563810 1770 ntBASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 AC105036.2-201ENST00000569468 176 ntBASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.4■□□□□ 0.7
PRDM9Q9NQV7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
PRDM9Q9NQV7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRDM9Q9NQV7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.39■□□□□ 0.7
PRDM9Q9NQV7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.39■□□□□ 0.7
PRDM9Q9NQV7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.39■□□□□ 0.7
PRDM9Q9NQV7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM9Q9NQV7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM9Q9NQV7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.39■□□□□ 0.69
PRDM9Q9NQV7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM9Q9NQV7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM9Q9NQV7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
PRDM9Q9NQV7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms