Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 AL590326.2-201ENST00000625139 305 ntBASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 AL355355.2-201ENST00000442321 338 ntBASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.69■■□□□ 1.38
ZFYVE28Q9HCC9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZFYVE28Q9HCC9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZFYVE28Q9HCC9 AC087633.2-202ENST00000565166 1439 ntBASIC23.68■■□□□ 1.38
ZFYVE28Q9HCC9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.68■■□□□ 1.38
ZFYVE28Q9HCC9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZFYVE28Q9HCC9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ZFYVE28Q9HCC9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC23.68■■□□□ 1.38
ZFYVE28Q9HCC9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.68■■□□□ 1.38
ZFYVE28Q9HCC9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.68■■□□□ 1.38
ZFYVE28Q9HCC9 AL049597.2-201ENST00000565575 961 ntBASIC23.68■■□□□ 1.38
ZFYVE28Q9HCC9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ZFYVE28Q9HCC9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
ZFYVE28Q9HCC9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZFYVE28Q9HCC9 AC068473.5-201ENST00000616428 2072 ntBASIC23.68■■□□□ 1.38
ZFYVE28Q9HCC9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZFYVE28Q9HCC9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZFYVE28Q9HCC9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.67■■□□□ 1.38
ZFYVE28Q9HCC9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
ZFYVE28Q9HCC9 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.67■■□□□ 1.38
ZFYVE28Q9HCC9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.67■■□□□ 1.38
ZFYVE28Q9HCC9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.67■■□□□ 1.38
ZFYVE28Q9HCC9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.67■■□□□ 1.38
ZFYVE28Q9HCC9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.67■■□□□ 1.38
ZFYVE28Q9HCC9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.67■■□□□ 1.38
ZFYVE28Q9HCC9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.67■■□□□ 1.38
ZFYVE28Q9HCC9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ZFYVE28Q9HCC9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZFYVE28Q9HCC9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZFYVE28Q9HCC9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.66■■□□□ 1.38
ZFYVE28Q9HCC9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZFYVE28Q9HCC9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZFYVE28Q9HCC9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZFYVE28Q9HCC9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.66■■□□□ 1.38
ZFYVE28Q9HCC9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZFYVE28Q9HCC9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC23.66■■□□□ 1.38
ZFYVE28Q9HCC9 AC026471.6-201ENST00000622954 1905 ntBASIC23.66■■□□□ 1.38
ZFYVE28Q9HCC9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZFYVE28Q9HCC9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZFYVE28Q9HCC9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZFYVE28Q9HCC9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC23.66■■□□□ 1.38
ZFYVE28Q9HCC9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 PGM5P4-201ENST00000421970 445 ntBASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 AC092865.7-201ENST00000641832 219 ntBASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 AC010542.4-201ENST00000563151 1910 ntBASIC23.65■■□□□ 1.38
ZFYVE28Q9HCC9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
ZFYVE28Q9HCC9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
ZFYVE28Q9HCC9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
ZFYVE28Q9HCC9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
ZFYVE28Q9HCC9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
ZFYVE28Q9HCC9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ZFYVE28Q9HCC9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.64■■□□□ 1.38
ZFYVE28Q9HCC9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ZFYVE28Q9HCC9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ZFYVE28Q9HCC9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
ZFYVE28Q9HCC9 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms