Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP29Q9HBJ7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP29Q9HBJ7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP29Q9HBJ7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
USP29Q9HBJ7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.19■□□□□ 0.98
USP29Q9HBJ7 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.19■□□□□ 0.98
USP29Q9HBJ7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.19■□□□□ 0.98
USP29Q9HBJ7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP29Q9HBJ7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
USP29Q9HBJ7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP29Q9HBJ7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
USP29Q9HBJ7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP29Q9HBJ7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.19■□□□□ 0.98
USP29Q9HBJ7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.18■□□□□ 0.98
USP29Q9HBJ7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP29Q9HBJ7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
USP29Q9HBJ7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.18■□□□□ 0.98
USP29Q9HBJ7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP29Q9HBJ7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP29Q9HBJ7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP29Q9HBJ7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.18■□□□□ 0.98
USP29Q9HBJ7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.18■□□□□ 0.98
USP29Q9HBJ7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
USP29Q9HBJ7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.18■□□□□ 0.98
USP29Q9HBJ7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
USP29Q9HBJ7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP29Q9HBJ7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP29Q9HBJ7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP29Q9HBJ7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP29Q9HBJ7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP29Q9HBJ7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
USP29Q9HBJ7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
USP29Q9HBJ7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
USP29Q9HBJ7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP29Q9HBJ7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.17■□□□□ 0.98
USP29Q9HBJ7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP29Q9HBJ7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.17■□□□□ 0.98
USP29Q9HBJ7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP29Q9HBJ7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.17■□□□□ 0.98
USP29Q9HBJ7 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.17■□□□□ 0.98
USP29Q9HBJ7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP29Q9HBJ7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP29Q9HBJ7 FP700111.2-201ENST00000619190 1892 ntBASIC21.17■□□□□ 0.98
USP29Q9HBJ7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.17■□□□□ 0.98
USP29Q9HBJ7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.17■□□□□ 0.98
USP29Q9HBJ7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP29Q9HBJ7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
USP29Q9HBJ7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP29Q9HBJ7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.16■□□□□ 0.98
USP29Q9HBJ7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP29Q9HBJ7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.15■□□□□ 0.98
USP29Q9HBJ7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP29Q9HBJ7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.15■□□□□ 0.98
USP29Q9HBJ7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP29Q9HBJ7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
USP29Q9HBJ7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP29Q9HBJ7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP29Q9HBJ7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.15■□□□□ 0.98
USP29Q9HBJ7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.15■□□□□ 0.98
USP29Q9HBJ7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP29Q9HBJ7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP29Q9HBJ7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.15■□□□□ 0.98
USP29Q9HBJ7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP29Q9HBJ7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP29Q9HBJ7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.15■□□□□ 0.98
USP29Q9HBJ7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP29Q9HBJ7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP29Q9HBJ7 AC020907.5-201ENST00000624372 1936 ntBASIC21.14■□□□□ 0.98
USP29Q9HBJ7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP29Q9HBJ7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.14■□□□□ 0.97
USP29Q9HBJ7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP29Q9HBJ7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
USP29Q9HBJ7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP29Q9HBJ7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.14■□□□□ 0.97
USP29Q9HBJ7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP29Q9HBJ7 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.14■□□□□ 0.97
USP29Q9HBJ7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.14■□□□□ 0.97
USP29Q9HBJ7 KRT18P20-201ENST00000548986 1279 ntBASIC21.14■□□□□ 0.97
USP29Q9HBJ7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.14■□□□□ 0.97
USP29Q9HBJ7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP29Q9HBJ7 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms