Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 MIR2861-201ENST00000636310 90 ntBASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 HLA-L-209ENST00000420110 1011 ntBASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 AC142086.2-201ENST00000569753 217 ntBASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.96■■□□□ 1.11
VRTNQ9H8Y1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VRTNQ9H8Y1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
VRTNQ9H8Y1 MIPEPP3-201ENST00000412105 444 ntBASIC21.95■■□□□ 1.1
VRTNQ9H8Y1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.95■■□□□ 1.1
VRTNQ9H8Y1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.95■■□□□ 1.1
VRTNQ9H8Y1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.95■■□□□ 1.1
VRTNQ9H8Y1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
VRTNQ9H8Y1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.95■■□□□ 1.1
VRTNQ9H8Y1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VRTNQ9H8Y1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VRTNQ9H8Y1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VRTNQ9H8Y1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.95■■□□□ 1.1
VRTNQ9H8Y1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 KRT18P68-201ENST00000392293 1000 ntBASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 PGM5P4-201ENST00000421970 445 ntBASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
VRTNQ9H8Y1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VRTNQ9H8Y1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.93■■□□□ 1.1
VRTNQ9H8Y1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
VRTNQ9H8Y1 SLC29A4P1-201ENST00000398760 971 ntBASIC21.93■■□□□ 1.1
VRTNQ9H8Y1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.93■■□□□ 1.1
VRTNQ9H8Y1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.93■■□□□ 1.1
VRTNQ9H8Y1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.93■■□□□ 1.1
VRTNQ9H8Y1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VRTNQ9H8Y1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VRTNQ9H8Y1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VRTNQ9H8Y1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.92■■□□□ 1.1
VRTNQ9H8Y1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
VRTNQ9H8Y1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VRTNQ9H8Y1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
VRTNQ9H8Y1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
VRTNQ9H8Y1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
VRTNQ9H8Y1 AL355472.2-201ENST00000422958 438 ntBASIC21.92■■□□□ 1.1
VRTNQ9H8Y1 AC073210.2-201ENST00000430369 194 ntBASIC21.92■■□□□ 1.1
VRTNQ9H8Y1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.92■■□□□ 1.1
VRTNQ9H8Y1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.92■■□□□ 1.1
VRTNQ9H8Y1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
VRTNQ9H8Y1 AC092118.2-201ENST00000613495 667 ntBASIC21.92■■□□□ 1.1
VRTNQ9H8Y1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VRTNQ9H8Y1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
VRTNQ9H8Y1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
VRTNQ9H8Y1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
VRTNQ9H8Y1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
VRTNQ9H8Y1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VRTNQ9H8Y1 KRT17P1-201ENST00000399211 1546 ntBASIC21.91■■□□□ 1.1
VRTNQ9H8Y1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VRTNQ9H8Y1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
VRTNQ9H8Y1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VRTNQ9H8Y1 KRT8P36-201ENST00000489121 1440 ntBASIC21.91■■□□□ 1.1
VRTNQ9H8Y1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms