Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCNX3Q9H6A9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PCNX3Q9H6A9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNX3Q9H6A9 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.69■□□□□ 0.58
PCNX3Q9H6A9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.69■□□□□ 0.58
PCNX3Q9H6A9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNX3Q9H6A9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.69■□□□□ 0.58
PCNX3Q9H6A9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PCNX3Q9H6A9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.69■□□□□ 0.58
PCNX3Q9H6A9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNX3Q9H6A9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.68■□□□□ 0.58
PCNX3Q9H6A9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCNX3Q9H6A9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PCNX3Q9H6A9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCNX3Q9H6A9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX3Q9H6A9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX3Q9H6A9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX3Q9H6A9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX3Q9H6A9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX3Q9H6A9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX3Q9H6A9 AC073314.1-201ENST00000568729 2216 ntBASIC18.68■□□□□ 0.58
PCNX3Q9H6A9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX3Q9H6A9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX3Q9H6A9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
PCNX3Q9H6A9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX3Q9H6A9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX3Q9H6A9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX3Q9H6A9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 AL512625.2-201ENST00000417533 625 ntBASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 GPX1P1-201ENST00000388829 606 ntBASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 AC005181.1-201ENST00000604782 1256 ntBASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 AC011484.1-201ENST00000377652 1995 ntBASIC18.67■□□□□ 0.58
PCNX3Q9H6A9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 AC006970.2-201ENST00000450065 779 ntBASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCNX3Q9H6A9 FP700111.2-201ENST00000619190 1892 ntBASIC18.65■□□□□ 0.58
PCNX3Q9H6A9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PCNX3Q9H6A9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCNX3Q9H6A9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.65■□□□□ 0.58
PCNX3Q9H6A9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCNX3Q9H6A9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCNX3Q9H6A9 KRT17P1-201ENST00000399211 1546 ntBASIC18.65■□□□□ 0.58
PCNX3Q9H6A9 CDV3P1-201ENST00000471403 739 ntBASIC18.65■□□□□ 0.58
PCNX3Q9H6A9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCNX3Q9H6A9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.65■□□□□ 0.58
PCNX3Q9H6A9 AC104771.1-201ENST00000603335 964 ntBASIC18.65■□□□□ 0.58
PCNX3Q9H6A9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCNX3Q9H6A9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.65■□□□□ 0.58
PCNX3Q9H6A9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCNX3Q9H6A9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCNX3Q9H6A9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCNX3Q9H6A9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCNX3Q9H6A9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCNX3Q9H6A9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
PCNX3Q9H6A9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.64■□□□□ 0.58
PCNX3Q9H6A9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.64■□□□□ 0.58
PCNX3Q9H6A9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCNX3Q9H6A9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCNX3Q9H6A9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCNX3Q9H6A9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCNX3Q9H6A9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCNX3Q9H6A9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCNX3Q9H6A9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCNX3Q9H6A9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms