Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATXN3LQ9H3M9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATXN3LQ9H3M9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.62■■□□□ 1.05
ATXN3LQ9H3M9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATXN3LQ9H3M9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATXN3LQ9H3M9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATXN3LQ9H3M9 UNC93B5-201ENST00000530315 699 ntBASIC21.62■■□□□ 1.05
ATXN3LQ9H3M9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATXN3LQ9H3M9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATXN3LQ9H3M9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.62■■□□□ 1.05
ATXN3LQ9H3M9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATXN3LQ9H3M9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.62■■□□□ 1.05
ATXN3LQ9H3M9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATXN3LQ9H3M9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 AC007375.3-201ENST00000600936 2314 ntBASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN3LQ9H3M9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN3LQ9H3M9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.6■■□□□ 1.05
ATXN3LQ9H3M9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN3LQ9H3M9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN3LQ9H3M9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN3LQ9H3M9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
ATXN3LQ9H3M9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN3LQ9H3M9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.6■■□□□ 1.05
ATXN3LQ9H3M9 AC128676.1-201ENST00000454392 318 ntBASIC21.6■■□□□ 1.05
ATXN3LQ9H3M9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN3LQ9H3M9 AC026366.1-201ENST00000488803 879 ntBASIC21.6■■□□□ 1.05
ATXN3LQ9H3M9 AC093827.2-201ENST00000512654 315 ntBASIC21.6■■□□□ 1.05
ATXN3LQ9H3M9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN3LQ9H3M9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.6■■□□□ 1.05
ATXN3LQ9H3M9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN3LQ9H3M9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN3LQ9H3M9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ATXN3LQ9H3M9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
ATXN3LQ9H3M9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATXN3LQ9H3M9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATXN3LQ9H3M9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATXN3LQ9H3M9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATXN3LQ9H3M9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATXN3LQ9H3M9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.59■■□□□ 1.05
ATXN3LQ9H3M9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ATXN3LQ9H3M9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.59■■□□□ 1.05
ATXN3LQ9H3M9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.59■■□□□ 1.05
ATXN3LQ9H3M9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATXN3LQ9H3M9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.59■■□□□ 1.05
ATXN3LQ9H3M9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.59■■□□□ 1.05
ATXN3LQ9H3M9 AC116050.2-201ENST00000612102 1779 ntBASIC21.59■■□□□ 1.05
ATXN3LQ9H3M9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
ATXN3LQ9H3M9 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.58■■□□□ 1.05
ATXN3LQ9H3M9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.58■■□□□ 1.05
ATXN3LQ9H3M9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
ATXN3LQ9H3M9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATXN3LQ9H3M9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.58■■□□□ 1.05
ATXN3LQ9H3M9 AC098590.1-201ENST00000468126 897 ntBASIC21.58■■□□□ 1.05
ATXN3LQ9H3M9 RPS2P52-201ENST00000469610 820 ntBASIC21.58■■□□□ 1.05
ATXN3LQ9H3M9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.58■■□□□ 1.05
ATXN3LQ9H3M9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATXN3LQ9H3M9 AP003097.1-201ENST00000530657 1135 ntBASIC21.58■■□□□ 1.05
ATXN3LQ9H3M9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATXN3LQ9H3M9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATXN3LQ9H3M9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATXN3LQ9H3M9 CYP21A1P-202ENST00000354927 1481 ntBASIC21.58■■□□□ 1.04
ATXN3LQ9H3M9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.58■■□□□ 1.04
ATXN3LQ9H3M9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATXN3LQ9H3M9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.57■■□□□ 1.04
ATXN3LQ9H3M9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATXN3LQ9H3M9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATXN3LQ9H3M9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATXN3LQ9H3M9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.57■■□□□ 1.04
ATXN3LQ9H3M9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATXN3LQ9H3M9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.57■■□□□ 1.04
ATXN3LQ9H3M9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATXN3LQ9H3M9 AC060766.5-201ENST00000590539 871 ntBASIC21.57■■□□□ 1.04
ATXN3LQ9H3M9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.57■■□□□ 1.04
ATXN3LQ9H3M9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATXN3LQ9H3M9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATXN3LQ9H3M9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATXN3LQ9H3M9 CLDN5-201ENST00000403084 2357 ntBASIC21.56■■□□□ 1.04
ATXN3LQ9H3M9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.56■■□□□ 1.04
ATXN3LQ9H3M9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATXN3LQ9H3M9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATXN3LQ9H3M9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.56■■□□□ 1.04
ATXN3LQ9H3M9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms