Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC22.08■■□□□ 1.13
CDH23Q9H251 NUDT16P1-203ENST00000513809 620 ntBASIC22.08■■□□□ 1.13
CDH23Q9H251 AC005363.2-201ENST00000618631 242 ntBASIC22.08■■□□□ 1.13
CDH23Q9H251 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDH23Q9H251 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CDH23Q9H251 CRYGFP-201ENST00000418459 633 ntBASIC22.08■■□□□ 1.12
CDH23Q9H251 TPM4P1-201ENST00000436100 807 ntBASIC22.08■■□□□ 1.12
CDH23Q9H251 DUX4L26-201ENST00000489078 1255 ntBASIC22.08■■□□□ 1.12
CDH23Q9H251 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.08■■□□□ 1.12
CDH23Q9H251 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.08■■□□□ 1.12
CDH23Q9H251 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
CDH23Q9H251 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.08■■□□□ 1.12
CDH23Q9H251 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CDH23Q9H251 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CDH23Q9H251 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CDH23Q9H251 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CDH23Q9H251 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CDH23Q9H251 AC010542.4-201ENST00000563151 1910 ntBASIC22.07■■□□□ 1.12
CDH23Q9H251 NMU-205ENST00000511469 756 ntTSL 3 BASIC22.07■■□□□ 1.12
CDH23Q9H251 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDH23Q9H251 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDH23Q9H251 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDH23Q9H251 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.07■■□□□ 1.12
CDH23Q9H251 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.07■■□□□ 1.12
CDH23Q9H251 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDH23Q9H251 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDH23Q9H251 AF186192.3-201ENST00000583427 947 ntBASIC22.07■■□□□ 1.12
CDH23Q9H251 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.07■■□□□ 1.12
CDH23Q9H251 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDH23Q9H251 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDH23Q9H251 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDH23Q9H251 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDH23Q9H251 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDH23Q9H251 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH23Q9H251 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.06■■□□□ 1.12
CDH23Q9H251 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.06■■□□□ 1.12
CDH23Q9H251 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH23Q9H251 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.06■■□□□ 1.12
CDH23Q9H251 AC087388.1-201ENST00000571370 1112 ntBASIC22.06■■□□□ 1.12
CDH23Q9H251 AC006557.6-201ENST00000623071 864 ntBASIC22.06■■□□□ 1.12
CDH23Q9H251 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDH23Q9H251 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.06■■□□□ 1.12
CDH23Q9H251 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH23Q9H251 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.06■■□□□ 1.12
CDH23Q9H251 AC124283.5-201ENST00000624661 1809 ntBASIC22.06■■□□□ 1.12
CDH23Q9H251 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.06■■□□□ 1.12
CDH23Q9H251 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH23Q9H251 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDH23Q9H251 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.06■■□□□ 1.12
CDH23Q9H251 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH23Q9H251 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH23Q9H251 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDH23Q9H251 AC120498.8-201ENST00000614275 531 ntBASIC22.05■■□□□ 1.12
CDH23Q9H251 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDH23Q9H251 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDH23Q9H251 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDH23Q9H251 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CDH23Q9H251 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDH23Q9H251 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.05■■□□□ 1.12
CDH23Q9H251 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.05■■□□□ 1.12
CDH23Q9H251 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDH23Q9H251 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDH23Q9H251 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDH23Q9H251 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.05■■□□□ 1.12
CDH23Q9H251 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDH23Q9H251 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDH23Q9H251 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDH23Q9H251 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDH23Q9H251 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDH23Q9H251 KRASP1-201ENST00000407852 552 ntBASIC22.04■■□□□ 1.12
CDH23Q9H251 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDH23Q9H251 SAPCD2P4-201ENST00000424595 1171 ntBASIC22.04■■□□□ 1.12
CDH23Q9H251 ISCU-203ENST00000431221 799 ntTSL 2 BASIC22.04■■□□□ 1.12
CDH23Q9H251 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC22.04■■□□□ 1.12
CDH23Q9H251 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDH23Q9H251 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.04■■□□□ 1.12
CDH23Q9H251 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDH23Q9H251 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CDH23Q9H251 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.04■■□□□ 1.12
CDH23Q9H251 KRT18P56-201ENST00000507275 550 ntBASIC22.04■■□□□ 1.12
CDH23Q9H251 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.04■■□□□ 1.12
CDH23Q9H251 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.04■■□□□ 1.12
CDH23Q9H251 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CDH23Q9H251 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDH23Q9H251 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDH23Q9H251 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.04■■□□□ 1.12
CDH23Q9H251 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CDH23Q9H251 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC22.03■■□□□ 1.12
CDH23Q9H251 AC006011.2-201ENST00000621313 1158 ntBASIC22.03■■□□□ 1.12
CDH23Q9H251 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CDH23Q9H251 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CDH23Q9H251 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CDH23Q9H251 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.03■■□□□ 1.12
CDH23Q9H251 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDH23Q9H251 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CDH23Q9H251 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
CDH23Q9H251 KRT18P68-201ENST00000392293 1000 ntBASIC22.03■■□□□ 1.12
CDH23Q9H251 WWOX-216ENST00000569818 525 ntBASIC22.03■■□□□ 1.12
CDH23Q9H251 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.03■■□□□ 1.12
CDH23Q9H251 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms