Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 AC131212.1-201ENST00000613771 668 ntBASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 BX005040.4-201ENST00000637145 1518 ntBASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 PCDHAC2-203ENST00000615316 3011 ntBASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 AC011484.1-201ENST00000377652 1995 ntBASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
COMMD4Q9H0A8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.1■□□□□ 0.49
COMMD4Q9H0A8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 HCG11-201ENST00000411553 5696 ntBASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 AP004607.4-201ENST00000530158 1459 ntBASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 AL136162.1-201ENST00000607711 1078 ntBASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.09■□□□□ 0.49
COMMD4Q9H0A8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
COMMD4Q9H0A8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
COMMD4Q9H0A8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
COMMD4Q9H0A8 AC135279.3-201ENST00000610945 1311 ntBASIC18.08■□□□□ 0.49
COMMD4Q9H0A8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
COMMD4Q9H0A8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD4Q9H0A8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.08■□□□□ 0.48
COMMD4Q9H0A8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
COMMD4Q9H0A8 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.08■□□□□ 0.48
COMMD4Q9H0A8 AC024257.2-201ENST00000549699 147 ntBASIC18.08■□□□□ 0.48
COMMD4Q9H0A8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD4Q9H0A8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.08■□□□□ 0.48
COMMD4Q9H0A8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.08■□□□□ 0.48
COMMD4Q9H0A8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD4Q9H0A8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD4Q9H0A8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms