Protein–RNA interactions for Protein: Q9C029

TRIM7, E3 ubiquitin-protein ligase TRIM7, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM7Q9C029 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
TRIM7Q9C029 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TRIM7Q9C029 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM7Q9C029 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM7Q9C029 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM7Q9C029 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM7Q9C029 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM7Q9C029 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM7Q9C029 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM7Q9C029 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.8■■□□□ 1.08
TRIM7Q9C029 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM7Q9C029 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.8■■□□□ 1.08
TRIM7Q9C029 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM7Q9C029 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TRIM7Q9C029 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
TRIM7Q9C029 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM7Q9C029 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM7Q9C029 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM7Q9C029 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM7Q9C029 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TRIM7Q9C029 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TRIM7Q9C029 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM7Q9C029 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM7Q9C029 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.79■■□□□ 1.08
TRIM7Q9C029 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM7Q9C029 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM7Q9C029 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TRIM7Q9C029 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM7Q9C029 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TRIM7Q9C029 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM7Q9C029 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM7Q9C029 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM7Q9C029 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.78■■□□□ 1.08
TRIM7Q9C029 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM7Q9C029 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM7Q9C029 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM7Q9C029 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM7Q9C029 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM7Q9C029 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM7Q9C029 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM7Q9C029 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
TRIM7Q9C029 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM7Q9C029 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM7Q9C029 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.78■■□□□ 1.08
TRIM7Q9C029 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM7Q9C029 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM7Q9C029 LINC01521-201ENST00000504184 1943 ntBASIC21.78■■□□□ 1.08
TRIM7Q9C029 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM7Q9C029 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM7Q9C029 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.77■■□□□ 1.08
TRIM7Q9C029 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM7Q9C029 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM7Q9C029 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM7Q9C029 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TRIM7Q9C029 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM7Q9C029 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.77■■□□□ 1.08
TRIM7Q9C029 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.77■■□□□ 1.08
TRIM7Q9C029 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM7Q9C029 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TRIM7Q9C029 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
TRIM7Q9C029 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM7Q9C029 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM7Q9C029 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRIM7Q9C029 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.76■■□□□ 1.07
TRIM7Q9C029 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
TRIM7Q9C029 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TRIM7Q9C029 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TRIM7Q9C029 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM7Q9C029 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM7Q9C029 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM7Q9C029 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM7Q9C029 AP005212.1-201ENST00000581547 1997 ntBASIC21.76■■□□□ 1.07
TRIM7Q9C029 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.76■■□□□ 1.07
TRIM7Q9C029 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM7Q9C029 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM7Q9C029 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.76■■□□□ 1.07
TRIM7Q9C029 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM7Q9C029 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TRIM7Q9C029 KRT16P2-201ENST00000414673 1423 ntBASIC21.76■■□□□ 1.07
TRIM7Q9C029 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
TRIM7Q9C029 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM7Q9C029 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM7Q9C029 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.76■■□□□ 1.07
TRIM7Q9C029 AC027702.1-201ENST00000563810 1770 ntBASIC21.76■■□□□ 1.07
TRIM7Q9C029 AC011484.1-201ENST00000377652 1995 ntBASIC21.76■■□□□ 1.07
TRIM7Q9C029 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM7Q9C029 AC007225.1-201ENST00000566331 1836 ntBASIC21.76■■□□□ 1.07
TRIM7Q9C029 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM7Q9C029 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIM7Q9C029 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM7Q9C029 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM7Q9C029 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TRIM7Q9C029 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TRIM7Q9C029 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM7Q9C029 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TRIM7Q9C029 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TRIM7Q9C029 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM7Q9C029 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM7Q9C029 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM7Q9C029 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms