Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
FOXP3Q9BZS1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXP3Q9BZS1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXP3Q9BZS1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
FOXP3Q9BZS1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXP3Q9BZS1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
FOXP3Q9BZS1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
FOXP3Q9BZS1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
FOXP3Q9BZS1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXP3Q9BZS1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXP3Q9BZS1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXP3Q9BZS1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXP3Q9BZS1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FOXP3Q9BZS1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXP3Q9BZS1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
FOXP3Q9BZS1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
FOXP3Q9BZS1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.19■□□□□ 0.98
FOXP3Q9BZS1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXP3Q9BZS1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXP3Q9BZS1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXP3Q9BZS1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXP3Q9BZS1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.19■□□□□ 0.98
FOXP3Q9BZS1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
FOXP3Q9BZS1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXP3Q9BZS1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.19■□□□□ 0.98
FOXP3Q9BZS1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXP3Q9BZS1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
FOXP3Q9BZS1 BX005040.4-201ENST00000637145 1518 ntBASIC21.19■□□□□ 0.98
FOXP3Q9BZS1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXP3Q9BZS1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.18■□□□□ 0.98
FOXP3Q9BZS1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXP3Q9BZS1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FOXP3Q9BZS1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
FOXP3Q9BZS1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXP3Q9BZS1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXP3Q9BZS1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
FOXP3Q9BZS1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.18■□□□□ 0.98
FOXP3Q9BZS1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXP3Q9BZS1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXP3Q9BZS1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
FOXP3Q9BZS1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXP3Q9BZS1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXP3Q9BZS1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXP3Q9BZS1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
FOXP3Q9BZS1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
FOXP3Q9BZS1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXP3Q9BZS1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FOXP3Q9BZS1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXP3Q9BZS1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.17■□□□□ 0.98
FOXP3Q9BZS1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.17■□□□□ 0.98
FOXP3Q9BZS1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.17■□□□□ 0.98
FOXP3Q9BZS1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.17■□□□□ 0.98
FOXP3Q9BZS1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.17■□□□□ 0.98
FOXP3Q9BZS1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
FOXP3Q9BZS1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FOXP3Q9BZS1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.17■□□□□ 0.98
FOXP3Q9BZS1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.17■□□□□ 0.98
FOXP3Q9BZS1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXP3Q9BZS1 AC011484.1-201ENST00000377652 1995 ntBASIC21.17■□□□□ 0.98
FOXP3Q9BZS1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXP3Q9BZS1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FOXP3Q9BZS1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FOXP3Q9BZS1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXP3Q9BZS1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
FOXP3Q9BZS1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FOXP3Q9BZS1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
FOXP3Q9BZS1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
FOXP3Q9BZS1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXP3Q9BZS1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXP3Q9BZS1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXP3Q9BZS1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXP3Q9BZS1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.16■□□□□ 0.98
FOXP3Q9BZS1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.16■□□□□ 0.98
FOXP3Q9BZS1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXP3Q9BZS1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXP3Q9BZS1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXP3Q9BZS1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
FOXP3Q9BZS1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
FOXP3Q9BZS1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 AC005224.4-201ENST00000583262 1652 ntBASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 KRT18P61-201ENST00000585825 1298 ntBASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms