Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 AC012414.1-201ENST00000556676 535 ntBASIC12.19□□□□□ -0.46
LIMD2Q9BT23 MAG-206ENST00000597035 542 ntTSL 4 BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 AC005224.4-201ENST00000583262 1652 ntBASIC12.19□□□□□ -0.46
LIMD2Q9BT23 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIMD2Q9BT23 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 AC003102.1-202ENST00000563394 1796 ntBASIC12.18□□□□□ -0.46
LIMD2Q9BT23 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 PARN-205ENST00000539279 1557 ntTSL 2 BASIC12.18□□□□□ -0.46
LIMD2Q9BT23 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 AL136967.2-201ENST00000623968 743 ntBASIC12.17□□□□□ -0.46
LIMD2Q9BT23 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIMD2Q9BT23 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms