Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.84■■□□□ 1.41
PTPN18Q99952 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.84■■□□□ 1.41
PTPN18Q99952 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN18Q99952 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.84■■□□□ 1.41
PTPN18Q99952 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.83■■□□□ 1.41
PTPN18Q99952 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN18Q99952 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN18Q99952 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN18Q99952 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
PTPN18Q99952 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.83■■□□□ 1.41
PTPN18Q99952 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.83■■□□□ 1.41
PTPN18Q99952 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.83■■□□□ 1.41
PTPN18Q99952 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.83■■□□□ 1.41
PTPN18Q99952 AC026471.5-201ENST00000615068 467 ntBASIC23.83■■□□□ 1.41
PTPN18Q99952 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PTPN18Q99952 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN18Q99952 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PTPN18Q99952 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PTPN18Q99952 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PTPN18Q99952 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PTPN18Q99952 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PTPN18Q99952 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.82■■□□□ 1.4
PTPN18Q99952 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN18Q99952 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN18Q99952 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN18Q99952 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
PTPN18Q99952 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN18Q99952 ARMC10P1-201ENST00000313754 855 ntBASIC23.82■■□□□ 1.4
PTPN18Q99952 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN18Q99952 AP003071.4-201ENST00000562276 1284 ntBASIC23.82■■□□□ 1.4
PTPN18Q99952 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN18Q99952 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN18Q99952 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
PTPN18Q99952 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN18Q99952 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PTPN18Q99952 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN18Q99952 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.81■■□□□ 1.4
PTPN18Q99952 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
PTPN18Q99952 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PTPN18Q99952 AC087633.2-202ENST00000565166 1439 ntBASIC23.81■■□□□ 1.4
PTPN18Q99952 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.81■■□□□ 1.4
PTPN18Q99952 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN18Q99952 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.81■■□□□ 1.4
PTPN18Q99952 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.81■■□□□ 1.4
PTPN18Q99952 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN18Q99952 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
PTPN18Q99952 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN18Q99952 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN18Q99952 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PTPN18Q99952 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN18Q99952 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC23.8■■□□□ 1.4
PTPN18Q99952 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.8■■□□□ 1.4
PTPN18Q99952 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.8■■□□□ 1.4
PTPN18Q99952 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.8■■□□□ 1.4
PTPN18Q99952 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.8■■□□□ 1.4
PTPN18Q99952 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.8■■□□□ 1.4
PTPN18Q99952 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN18Q99952 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN18Q99952 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PTPN18Q99952 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN18Q99952 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN18Q99952 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN18Q99952 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN18Q99952 MMP23A-201ENST00000234610 1017 ntBASIC23.79■■□□□ 1.4
PTPN18Q99952 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.79■■□□□ 1.4
PTPN18Q99952 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
PTPN18Q99952 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC23.79■■□□□ 1.4
PTPN18Q99952 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.79■■□□□ 1.4
PTPN18Q99952 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.79■■□□□ 1.4
PTPN18Q99952 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.79■■□□□ 1.4
PTPN18Q99952 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.79■■□□□ 1.4
PTPN18Q99952 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN18Q99952 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.79■■□□□ 1.4
PTPN18Q99952 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN18Q99952 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN18Q99952 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.79■■□□□ 1.4
PTPN18Q99952 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN18Q99952 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.79■■□□□ 1.4
PTPN18Q99952 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN18Q99952 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.78■■□□□ 1.4
PTPN18Q99952 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.78■■□□□ 1.4
PTPN18Q99952 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC23.78■■□□□ 1.4
PTPN18Q99952 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN18Q99952 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN18Q99952 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN18Q99952 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN18Q99952 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.77■■□□□ 1.4
PTPN18Q99952 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN18Q99952 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN18Q99952 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.77■■□□□ 1.4
PTPN18Q99952 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN18Q99952 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN18Q99952 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.77■■□□□ 1.4
PTPN18Q99952 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN18Q99952 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.77■■□□□ 1.4
PTPN18Q99952 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN18Q99952 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN18Q99952 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN18Q99952 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN18Q99952 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms