Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CDK5RAP1Q96SZ6 KRT17P1-201ENST00000399211 1546 ntBASIC21.39■■□□□ 1.02
CDK5RAP1Q96SZ6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDK5RAP1Q96SZ6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDK5RAP1Q96SZ6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDK5RAP1Q96SZ6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.39■■□□□ 1.01
CDK5RAP1Q96SZ6 CD99P1-205ENST00000527459 561 ntBASIC21.39■■□□□ 1.01
CDK5RAP1Q96SZ6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.39■■□□□ 1.01
CDK5RAP1Q96SZ6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDK5RAP1Q96SZ6 AL024507.2-201ENST00000606070 2574 ntBASIC21.39■■□□□ 1.01
CDK5RAP1Q96SZ6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 AC105020.6-201ENST00000621523 1217 ntBASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDK5RAP1Q96SZ6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.37■■□□□ 1.01
CDK5RAP1Q96SZ6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK5RAP1Q96SZ6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.36■■□□□ 1.01
CDK5RAP1Q96SZ6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK5RAP1Q96SZ6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK5RAP1Q96SZ6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK5RAP1Q96SZ6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.36■■□□□ 1.01
CDK5RAP1Q96SZ6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
CDK5RAP1Q96SZ6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.36■■□□□ 1.01
CDK5RAP1Q96SZ6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CDK5RAP1Q96SZ6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.36■■□□□ 1.01
CDK5RAP1Q96SZ6 LINC00565-201ENST00000562710 2331 ntBASIC21.36■■□□□ 1.01
CDK5RAP1Q96SZ6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK5RAP1Q96SZ6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK5RAP1Q96SZ6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK5RAP1Q96SZ6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDK5RAP1Q96SZ6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDK5RAP1Q96SZ6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CDK5RAP1Q96SZ6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.35■■□□□ 1.01
CDK5RAP1Q96SZ6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDK5RAP1Q96SZ6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDK5RAP1Q96SZ6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.35■■□□□ 1.01
CDK5RAP1Q96SZ6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.35■■□□□ 1.01
CDK5RAP1Q96SZ6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDK5RAP1Q96SZ6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDK5RAP1Q96SZ6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDK5RAP1Q96SZ6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDK5RAP1Q96SZ6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDK5RAP1Q96SZ6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDK5RAP1Q96SZ6 FEM1AP4-201ENST00000443167 1987 ntBASIC21.34■■□□□ 1.01
CDK5RAP1Q96SZ6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDK5RAP1Q96SZ6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.34■■□□□ 1.01
CDK5RAP1Q96SZ6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDK5RAP1Q96SZ6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.34■■□□□ 1.01
CDK5RAP1Q96SZ6 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.34■■□□□ 1.01
CDK5RAP1Q96SZ6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.34■■□□□ 1.01
CDK5RAP1Q96SZ6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.34■■□□□ 1.01
CDK5RAP1Q96SZ6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.34■■□□□ 1.01
CDK5RAP1Q96SZ6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.34■■□□□ 1.01
CDK5RAP1Q96SZ6 AC083880.1-201ENST00000608266 535 ntBASIC21.34■■□□□ 1.01
CDK5RAP1Q96SZ6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDK5RAP1Q96SZ6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms