Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NSMCE2Q96MF7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
NSMCE2Q96MF7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NSMCE2Q96MF7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NSMCE2Q96MF7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NSMCE2Q96MF7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NSMCE2Q96MF7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.37■□□□□ 0.69
NSMCE2Q96MF7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NSMCE2Q96MF7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NSMCE2Q96MF7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NSMCE2Q96MF7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.37■□□□□ 0.69
NSMCE2Q96MF7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NSMCE2Q96MF7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.37■□□□□ 0.69
NSMCE2Q96MF7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.37■□□□□ 0.69
NSMCE2Q96MF7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.37■□□□□ 0.69
NSMCE2Q96MF7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NSMCE2Q96MF7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NSMCE2Q96MF7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NSMCE2Q96MF7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.37■□□□□ 0.69
NSMCE2Q96MF7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NSMCE2Q96MF7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NSMCE2Q96MF7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 AC055733.4-201ENST00000638462 1354 ntBASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 AC087289.5-201ENST00000586076 3175 ntBASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NSMCE2Q96MF7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NSMCE2Q96MF7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NSMCE2Q96MF7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NSMCE2Q96MF7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NSMCE2Q96MF7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NSMCE2Q96MF7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NSMCE2Q96MF7 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.35■□□□□ 0.69
NSMCE2Q96MF7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NSMCE2Q96MF7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.35■□□□□ 0.69
NSMCE2Q96MF7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.35■□□□□ 0.69
NSMCE2Q96MF7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NSMCE2Q96MF7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NSMCE2Q96MF7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.35■□□□□ 0.69
NSMCE2Q96MF7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NSMCE2Q96MF7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NSMCE2Q96MF7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 AC092720.2-201ENST00000602388 1665 ntBASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 SMG8-203ENST00000578922 2178 ntBASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NSMCE2Q96MF7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.33■□□□□ 0.69
NSMCE2Q96MF7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NSMCE2Q96MF7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NSMCE2Q96MF7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
NSMCE2Q96MF7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NSMCE2Q96MF7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.33■□□□□ 0.68
NSMCE2Q96MF7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NSMCE2Q96MF7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
NSMCE2Q96MF7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NSMCE2Q96MF7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NSMCE2Q96MF7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NSMCE2Q96MF7 TCF3P1-201ENST00000423021 1937 ntBASIC19.33■□□□□ 0.68
NSMCE2Q96MF7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NSMCE2Q96MF7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NSMCE2Q96MF7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NSMCE2Q96MF7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NSMCE2Q96MF7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.33■□□□□ 0.68
NSMCE2Q96MF7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.32■□□□□ 0.68
NSMCE2Q96MF7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
NSMCE2Q96MF7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NSMCE2Q96MF7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NSMCE2Q96MF7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms