Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHDQ96IW2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHDQ96IW2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHDQ96IW2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.93■□□□□ 0.94
SHDQ96IW2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.93■□□□□ 0.94
SHDQ96IW2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.93■□□□□ 0.94
SHDQ96IW2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHDQ96IW2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHDQ96IW2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.92■□□□□ 0.94
SHDQ96IW2 TMPOP1-202ENST00000424642 1267 ntBASIC20.92■□□□□ 0.94
SHDQ96IW2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.92■□□□□ 0.94
SHDQ96IW2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SHDQ96IW2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.92■□□□□ 0.94
SHDQ96IW2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHDQ96IW2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.92■□□□□ 0.94
SHDQ96IW2 AC093323.1-202ENST00000635031 2045 ntBASIC20.92■□□□□ 0.94
SHDQ96IW2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SHDQ96IW2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.91■□□□□ 0.94
SHDQ96IW2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHDQ96IW2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHDQ96IW2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.91■□□□□ 0.94
SHDQ96IW2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHDQ96IW2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.91■□□□□ 0.94
SHDQ96IW2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.91■□□□□ 0.94
SHDQ96IW2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.91■□□□□ 0.94
SHDQ96IW2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SHDQ96IW2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.91■□□□□ 0.94
SHDQ96IW2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.91■□□□□ 0.94
SHDQ96IW2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHDQ96IW2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHDQ96IW2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHDQ96IW2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHDQ96IW2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.9■□□□□ 0.94
SHDQ96IW2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHDQ96IW2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHDQ96IW2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHDQ96IW2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHDQ96IW2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHDQ96IW2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.9■□□□□ 0.94
SHDQ96IW2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.9■□□□□ 0.94
SHDQ96IW2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.9■□□□□ 0.94
SHDQ96IW2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.9■□□□□ 0.94
SHDQ96IW2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SHDQ96IW2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
SHDQ96IW2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHDQ96IW2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
SHDQ96IW2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.9■□□□□ 0.94
SHDQ96IW2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SHDQ96IW2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SHDQ96IW2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SHDQ96IW2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SHDQ96IW2 AC068473.5-201ENST00000616428 2072 ntBASIC20.89■□□□□ 0.93
SHDQ96IW2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SHDQ96IW2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SHDQ96IW2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHDQ96IW2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHDQ96IW2 AL445228.2-201ENST00000605589 952 ntBASIC20.89■□□□□ 0.93
SHDQ96IW2 AC026471.5-201ENST00000615068 467 ntBASIC20.89■□□□□ 0.93
SHDQ96IW2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHDQ96IW2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHDQ96IW2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHDQ96IW2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHDQ96IW2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.89■□□□□ 0.93
SHDQ96IW2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHDQ96IW2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHDQ96IW2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.88■□□□□ 0.93
SHDQ96IW2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHDQ96IW2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SHDQ96IW2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.88■□□□□ 0.93
SHDQ96IW2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHDQ96IW2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHDQ96IW2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHDQ96IW2 AL355355.2-201ENST00000442321 338 ntBASIC20.88■□□□□ 0.93
SHDQ96IW2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHDQ96IW2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SHDQ96IW2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.88■□□□□ 0.93
SHDQ96IW2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SHDQ96IW2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHDQ96IW2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHDQ96IW2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.88■□□□□ 0.93
SHDQ96IW2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.88■□□□□ 0.93
SHDQ96IW2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.88■□□□□ 0.93
SHDQ96IW2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHDQ96IW2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHDQ96IW2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SHDQ96IW2 MMP23A-201ENST00000234610 1017 ntBASIC20.87■□□□□ 0.93
SHDQ96IW2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHDQ96IW2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHDQ96IW2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
SHDQ96IW2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.87■□□□□ 0.93
SHDQ96IW2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.87■□□□□ 0.93
SHDQ96IW2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SHDQ96IW2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SHDQ96IW2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.87■□□□□ 0.93
SHDQ96IW2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SHDQ96IW2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHDQ96IW2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHDQ96IW2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHDQ96IW2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.87■□□□□ 0.93
SHDQ96IW2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms