Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PDLIM5Q96HC4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
PDLIM5Q96HC4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.12■□□□□ 0.81
PDLIM5Q96HC4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.12■□□□□ 0.81
PDLIM5Q96HC4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDLIM5Q96HC4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.12■□□□□ 0.81
PDLIM5Q96HC4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
PDLIM5Q96HC4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.12■□□□□ 0.81
PDLIM5Q96HC4 KRT18P5-201ENST00000436075 1291 ntBASIC20.12■□□□□ 0.81
PDLIM5Q96HC4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.12■□□□□ 0.81
PDLIM5Q96HC4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.12■□□□□ 0.81
PDLIM5Q96HC4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.12■□□□□ 0.81
PDLIM5Q96HC4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.12■□□□□ 0.81
PDLIM5Q96HC4 AL121603.2-201ENST00000557373 2117 ntBASIC20.12■□□□□ 0.81
PDLIM5Q96HC4 AC092667.1-201ENST00000434301 2586 ntBASIC20.12■□□□□ 0.81
PDLIM5Q96HC4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.12■□□□□ 0.81
PDLIM5Q96HC4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 CDV3P1-201ENST00000471403 739 ntBASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 TERF1P5-201ENST00000477545 1207 ntBASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 AC010536.3-201ENST00000620306 533 ntBASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM5Q96HC4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 RARRES2P6-201ENST00000567333 442 ntBASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 AC073130.3-201ENST00000624389 2278 ntBASIC20.1■□□□□ 0.81
PDLIM5Q96HC4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 AL162377.1-201ENST00000618844 1793 ntBASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.09■□□□□ 0.81
PDLIM5Q96HC4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PDLIM5Q96HC4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PDLIM5Q96HC4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDLIM5Q96HC4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDLIM5Q96HC4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDLIM5Q96HC4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PDLIM5Q96HC4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PDLIM5Q96HC4 AC007322.4-201ENST00000509611 723 ntBASIC20.08■□□□□ 0.81
PDLIM5Q96HC4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.08■□□□□ 0.81
PDLIM5Q96HC4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.08■□□□□ 0.81
PDLIM5Q96HC4 AL162412.1-201ENST00000567129 965 ntBASIC20.08■□□□□ 0.81
PDLIM5Q96HC4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
PDLIM5Q96HC4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.08■□□□□ 0.8
PDLIM5Q96HC4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDLIM5Q96HC4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PDLIM5Q96HC4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms