Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SMARCD1Q96GM5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCD1Q96GM5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCD1Q96GM5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCD1Q96GM5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.69■■□□□ 1.06
SMARCD1Q96GM5 KRT18P68-201ENST00000392293 1000 ntBASIC21.69■■□□□ 1.06
SMARCD1Q96GM5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.69■■□□□ 1.06
SMARCD1Q96GM5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.69■■□□□ 1.06
SMARCD1Q96GM5 AL589743.5-201ENST00000616611 1050 ntBASIC21.69■■□□□ 1.06
SMARCD1Q96GM5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SMARCD1Q96GM5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.69■■□□□ 1.06
SMARCD1Q96GM5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.69■■□□□ 1.06
SMARCD1Q96GM5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.69■■□□□ 1.06
SMARCD1Q96GM5 AC121338.2-201ENST00000622535 1744 ntBASIC21.69■■□□□ 1.06
SMARCD1Q96GM5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
SMARCD1Q96GM5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCD1Q96GM5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 AC087633.2-202ENST00000565166 1439 ntBASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCD1Q96GM5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 PGM5P4-201ENST00000421970 445 ntBASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCD1Q96GM5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
SMARCD1Q96GM5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCD1Q96GM5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCD1Q96GM5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCD1Q96GM5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.66■■□□□ 1.06
SMARCD1Q96GM5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.66■■□□□ 1.06
SMARCD1Q96GM5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SMARCD1Q96GM5 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCD1Q96GM5 DUSP5P2-201ENST00000426873 1033 ntBASIC21.66■■□□□ 1.06
SMARCD1Q96GM5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.66■■□□□ 1.06
SMARCD1Q96GM5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.66■■□□□ 1.06
SMARCD1Q96GM5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.66■■□□□ 1.06
SMARCD1Q96GM5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCD1Q96GM5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.66■■□□□ 1.06
SMARCD1Q96GM5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SMARCD1Q96GM5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCD1Q96GM5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.65■■□□□ 1.06
SMARCD1Q96GM5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCD1Q96GM5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SMARCD1Q96GM5 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCD1Q96GM5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.65■■□□□ 1.06
SMARCD1Q96GM5 AC091874.3-201ENST00000512672 1195 ntBASIC21.65■■□□□ 1.06
SMARCD1Q96GM5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCD1Q96GM5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.65■■□□□ 1.06
SMARCD1Q96GM5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.65■■□□□ 1.06
SMARCD1Q96GM5 AC105020.6-201ENST00000621523 1217 ntBASIC21.65■■□□□ 1.06
SMARCD1Q96GM5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.65■■□□□ 1.06
SMARCD1Q96GM5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCD1Q96GM5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCD1Q96GM5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SMARCD1Q96GM5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCD1Q96GM5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCD1Q96GM5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCD1Q96GM5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SMARCD1Q96GM5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
SMARCD1Q96GM5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SMARCD1Q96GM5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms