Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.66■□□□□ 0.9
CHMP6Q96FZ7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CHMP6Q96FZ7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP6Q96FZ7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
CHMP6Q96FZ7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.66■□□□□ 0.9
CHMP6Q96FZ7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP6Q96FZ7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.66■□□□□ 0.9
CHMP6Q96FZ7 AC138932.1-201ENST00000534164 6830 ntBASIC20.66■□□□□ 0.9
CHMP6Q96FZ7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP6Q96FZ7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP6Q96FZ7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP6Q96FZ7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP6Q96FZ7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP6Q96FZ7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP6Q96FZ7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 AC133637.1-201ENST00000624115 1537 ntBASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP6Q96FZ7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHMP6Q96FZ7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CHMP6Q96FZ7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.64■□□□□ 0.9
CHMP6Q96FZ7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHMP6Q96FZ7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.64■□□□□ 0.9
CHMP6Q96FZ7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 AP004607.7-201ENST00000527152 1677 ntBASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CHMP6Q96FZ7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP6Q96FZ7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP6Q96FZ7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP6Q96FZ7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.63■□□□□ 0.89
CHMP6Q96FZ7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP6Q96FZ7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CHMP6Q96FZ7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP6Q96FZ7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP6Q96FZ7 AC087239.1-201ENST00000622671 572 ntBASIC20.63■□□□□ 0.89
CHMP6Q96FZ7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP6Q96FZ7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP6Q96FZ7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP6Q96FZ7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP6Q96FZ7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP6Q96FZ7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CHMP6Q96FZ7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP6Q96FZ7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP6Q96FZ7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP6Q96FZ7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP6Q96FZ7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CHMP6Q96FZ7 AC125437.2-201ENST00000625180 2167 ntBASIC20.62■□□□□ 0.89
CHMP6Q96FZ7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CHMP6Q96FZ7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CHMP6Q96FZ7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP6Q96FZ7 AL356441.2-201ENST00000443009 864 ntBASIC20.62■□□□□ 0.89
CHMP6Q96FZ7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP6Q96FZ7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP6Q96FZ7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CHMP6Q96FZ7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP6Q96FZ7 AL158211.5-201ENST00000623583 2518 ntBASIC20.62■□□□□ 0.89
CHMP6Q96FZ7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP6Q96FZ7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CHMP6Q96FZ7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP6Q96FZ7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms