Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.89■□□□□ 0.94
CCDC97Q96F63 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC97Q96F63 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CCDC97Q96F63 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC97Q96F63 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC97Q96F63 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC97Q96F63 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC97Q96F63 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC97Q96F63 AL109923.1-201ENST00000618799 583 ntBASIC20.89■□□□□ 0.93
CCDC97Q96F63 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC97Q96F63 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC97Q96F63 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC97Q96F63 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC97Q96F63 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC97Q96F63 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC97Q96F63 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC97Q96F63 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.88■□□□□ 0.93
CCDC97Q96F63 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC97Q96F63 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC97Q96F63 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC97Q96F63 AC053503.5-201ENST00000601508 636 ntBASIC20.88■□□□□ 0.93
CCDC97Q96F63 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC97Q96F63 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CCDC97Q96F63 AC061975.6-201ENST00000579045 1553 ntBASIC20.88■□□□□ 0.93
CCDC97Q96F63 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC97Q96F63 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC97Q96F63 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC97Q96F63 AC005229.4-201ENST00000610085 2198 ntBASIC20.87■□□□□ 0.93
CCDC97Q96F63 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.87■□□□□ 0.93
CCDC97Q96F63 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC97Q96F63 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC97Q96F63 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC97Q96F63 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC97Q96F63 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC97Q96F63 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC97Q96F63 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC97Q96F63 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC97Q96F63 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC97Q96F63 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC97Q96F63 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC97Q96F63 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC97Q96F63 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC97Q96F63 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC97Q96F63 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
CCDC97Q96F63 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC97Q96F63 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC97Q96F63 ABHD17AP1-201ENST00000358206 933 ntBASIC20.86■□□□□ 0.93
CCDC97Q96F63 AL355802.2-201ENST00000402069 882 ntBASIC20.86■□□□□ 0.93
CCDC97Q96F63 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC97Q96F63 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.86■□□□□ 0.93
CCDC97Q96F63 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC97Q96F63 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC97Q96F63 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CCDC97Q96F63 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC97Q96F63 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC97Q96F63 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC97Q96F63 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC97Q96F63 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC97Q96F63 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC97Q96F63 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC97Q96F63 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CCDC97Q96F63 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC97Q96F63 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC97Q96F63 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC97Q96F63 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC97Q96F63 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CCDC97Q96F63 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC97Q96F63 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC97Q96F63 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC97Q96F63 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC97Q96F63 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC97Q96F63 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC97Q96F63 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC97Q96F63 TMEM191A-211ENST00000637163 1067 ntBASIC20.85■□□□□ 0.93
CCDC97Q96F63 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CCDC97Q96F63 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CCDC97Q96F63 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC97Q96F63 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC97Q96F63 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC97Q96F63 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC97Q96F63 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC97Q96F63 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC97Q96F63 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC97Q96F63 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC97Q96F63 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC97Q96F63 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CCDC97Q96F63 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC97Q96F63 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC97Q96F63 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
CCDC97Q96F63 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC97Q96F63 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC97Q96F63 FEM1AP4-201ENST00000443167 1987 ntBASIC20.84■□□□□ 0.93
CCDC97Q96F63 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC97Q96F63 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC97Q96F63 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC97Q96F63 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CCDC97Q96F63 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC97Q96F63 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC97Q96F63 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CCDC97Q96F63 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms