Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 AC116050.2-201ENST00000612102 1779 ntBASIC21.15■□□□□ 0.98
HDAC11Q96DB2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HDAC11Q96DB2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HDAC11Q96DB2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
HDAC11Q96DB2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HDAC11Q96DB2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HDAC11Q96DB2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
HDAC11Q96DB2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC11Q96DB2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC11Q96DB2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC11Q96DB2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.14■□□□□ 0.97
HDAC11Q96DB2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.14■□□□□ 0.97
HDAC11Q96DB2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
HDAC11Q96DB2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
HDAC11Q96DB2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC11Q96DB2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC11Q96DB2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC11Q96DB2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC11Q96DB2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
HDAC11Q96DB2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC11Q96DB2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
HDAC11Q96DB2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
HDAC11Q96DB2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HDAC11Q96DB2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HDAC11Q96DB2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HDAC11Q96DB2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.13■□□□□ 0.97
HDAC11Q96DB2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HDAC11Q96DB2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.13■□□□□ 0.97
HDAC11Q96DB2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
HDAC11Q96DB2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HDAC11Q96DB2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.13■□□□□ 0.97
HDAC11Q96DB2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.13■□□□□ 0.97
HDAC11Q96DB2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.12■□□□□ 0.97
HDAC11Q96DB2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HDAC11Q96DB2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.12■□□□□ 0.97
HDAC11Q96DB2 AC006015.1-201ENST00000429970 570 ntBASIC21.12■□□□□ 0.97
HDAC11Q96DB2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HDAC11Q96DB2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.12■□□□□ 0.97
HDAC11Q96DB2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
HDAC11Q96DB2 AC010536.3-201ENST00000620306 533 ntBASIC21.12■□□□□ 0.97
HDAC11Q96DB2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HDAC11Q96DB2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HDAC11Q96DB2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.12■□□□□ 0.97
HDAC11Q96DB2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HDAC11Q96DB2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HDAC11Q96DB2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
HDAC11Q96DB2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.12■□□□□ 0.97
HDAC11Q96DB2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HDAC11Q96DB2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HDAC11Q96DB2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
HDAC11Q96DB2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
HDAC11Q96DB2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HDAC11Q96DB2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HDAC11Q96DB2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HDAC11Q96DB2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.11■□□□□ 0.97
HDAC11Q96DB2 AC016769.1-201ENST00000409132 1010 ntBASIC21.11■□□□□ 0.97
HDAC11Q96DB2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HDAC11Q96DB2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.11■□□□□ 0.97
HDAC11Q96DB2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.11■□□□□ 0.97
HDAC11Q96DB2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
HDAC11Q96DB2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HDAC11Q96DB2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HDAC11Q96DB2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HDAC11Q96DB2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HDAC11Q96DB2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.1■□□□□ 0.97
HDAC11Q96DB2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.1■□□□□ 0.97
HDAC11Q96DB2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HDAC11Q96DB2 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.1■□□□□ 0.97
HDAC11Q96DB2 TERF1P5-201ENST00000477545 1207 ntBASIC21.1■□□□□ 0.97
HDAC11Q96DB2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HDAC11Q96DB2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HDAC11Q96DB2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HDAC11Q96DB2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HDAC11Q96DB2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.1■□□□□ 0.97
HDAC11Q96DB2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HDAC11Q96DB2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HDAC11Q96DB2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.1■□□□□ 0.97
HDAC11Q96DB2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HDAC11Q96DB2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.09■□□□□ 0.97
HDAC11Q96DB2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.09■□□□□ 0.97
HDAC11Q96DB2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HDAC11Q96DB2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HDAC11Q96DB2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
HDAC11Q96DB2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HDAC11Q96DB2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.09■□□□□ 0.97
HDAC11Q96DB2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.09■□□□□ 0.97
HDAC11Q96DB2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HDAC11Q96DB2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.09■□□□□ 0.97
HDAC11Q96DB2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HDAC11Q96DB2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HDAC11Q96DB2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.09■□□□□ 0.97
HDAC11Q96DB2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.09■□□□□ 0.97
HDAC11Q96DB2 MFSD11-216ENST00000590393 1141 ntBASIC21.09■□□□□ 0.97
HDAC11Q96DB2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms