Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBE2E3Q969T4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE2E3Q969T4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE2E3Q969T4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.75■□□□□ 0.75
UBE2E3Q969T4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.75■□□□□ 0.75
UBE2E3Q969T4 AL162430.1-201ENST00000480705 870 ntBASIC19.75■□□□□ 0.75
UBE2E3Q969T4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
UBE2E3Q969T4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.75■□□□□ 0.75
UBE2E3Q969T4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE2E3Q969T4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE2E3Q969T4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBE2E3Q969T4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBE2E3Q969T4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE2E3Q969T4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 AC013268.1-206ENST00000638368 961 ntBASIC19.74■□□□□ 0.75
UBE2E3Q969T4 AC112229.1-201ENST00000639295 961 ntBASIC19.74■□□□□ 0.75
UBE2E3Q969T4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2E3Q969T4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2E3Q969T4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2E3Q969T4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
UBE2E3Q969T4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2E3Q969T4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2E3Q969T4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
UBE2E3Q969T4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
UBE2E3Q969T4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2E3Q969T4 AL591742.1-201ENST00000604433 565 ntBASIC19.73■□□□□ 0.75
UBE2E3Q969T4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.73■□□□□ 0.75
UBE2E3Q969T4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2E3Q969T4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2E3Q969T4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2E3Q969T4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.73■□□□□ 0.75
UBE2E3Q969T4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
UBE2E3Q969T4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
UBE2E3Q969T4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2E3Q969T4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.73■□□□□ 0.75
UBE2E3Q969T4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2E3Q969T4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2E3Q969T4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2E3Q969T4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2E3Q969T4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.72■□□□□ 0.75
UBE2E3Q969T4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.72■□□□□ 0.75
UBE2E3Q969T4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2E3Q969T4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2E3Q969T4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.72■□□□□ 0.75
UBE2E3Q969T4 AC007322.4-201ENST00000509611 723 ntBASIC19.72■□□□□ 0.75
UBE2E3Q969T4 AL162412.1-201ENST00000567129 965 ntBASIC19.72■□□□□ 0.75
UBE2E3Q969T4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.72■□□□□ 0.75
UBE2E3Q969T4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
UBE2E3Q969T4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2E3Q969T4 FP700111.2-201ENST00000619190 1892 ntBASIC19.72■□□□□ 0.75
UBE2E3Q969T4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.72■□□□□ 0.75
UBE2E3Q969T4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2E3Q969T4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2E3Q969T4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.72■□□□□ 0.75
UBE2E3Q969T4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2E3Q969T4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
UBE2E3Q969T4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms