Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.12■□□□□ 0.49
USP9XQ93008 AC073195.1-201ENST00000607241 877 ntBASIC18.12■□□□□ 0.49
USP9XQ93008 AP000525.1-201ENST00000608286 694 ntBASIC18.12■□□□□ 0.49
USP9XQ93008 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.12■□□□□ 0.49
USP9XQ93008 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP9XQ93008 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.12■□□□□ 0.49
USP9XQ93008 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP9XQ93008 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.12■□□□□ 0.49
USP9XQ93008 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP9XQ93008 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP9XQ93008 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.12■□□□□ 0.49
USP9XQ93008 FAM197Y1-201ENST00000421178 764 ntBASIC18.12■□□□□ 0.49
USP9XQ93008 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP9XQ93008 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
USP9XQ93008 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.12■□□□□ 0.49
USP9XQ93008 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.12■□□□□ 0.49
USP9XQ93008 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP9XQ93008 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP9XQ93008 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP9XQ93008 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.11■□□□□ 0.49
USP9XQ93008 AL390955.1-201ENST00000428694 934 ntBASIC18.11■□□□□ 0.49
USP9XQ93008 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP9XQ93008 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP9XQ93008 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP9XQ93008 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP9XQ93008 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP9XQ93008 AC091076.1-201ENST00000610741 619 ntBASIC18.11■□□□□ 0.49
USP9XQ93008 AL358472.4-201ENST00000633140 710 ntBASIC18.11■□□□□ 0.49
USP9XQ93008 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP9XQ93008 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP9XQ93008 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.11■□□□□ 0.49
USP9XQ93008 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
USP9XQ93008 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.1■□□□□ 0.49
USP9XQ93008 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP9XQ93008 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP9XQ93008 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP9XQ93008 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP9XQ93008 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.1■□□□□ 0.49
USP9XQ93008 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.1■□□□□ 0.49
USP9XQ93008 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
USP9XQ93008 AL031963.3-201ENST00000606441 850 ntBASIC18.1■□□□□ 0.49
USP9XQ93008 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.1■□□□□ 0.49
USP9XQ93008 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP9XQ93008 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP9XQ93008 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP9XQ93008 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP9XQ93008 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
USP9XQ93008 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.1■□□□□ 0.49
USP9XQ93008 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP9XQ93008 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.1■□□□□ 0.49
USP9XQ93008 AC087388.1-201ENST00000571370 1112 ntBASIC18.1■□□□□ 0.49
USP9XQ93008 AC006538.3-201ENST00000612495 578 ntBASIC18.1■□□□□ 0.49
USP9XQ93008 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.1■□□□□ 0.49
USP9XQ93008 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.1■□□□□ 0.49
USP9XQ93008 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP9XQ93008 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
USP9XQ93008 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP9XQ93008 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.09■□□□□ 0.49
USP9XQ93008 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP9XQ93008 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.09■□□□□ 0.49
USP9XQ93008 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.09■□□□□ 0.49
USP9XQ93008 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
USP9XQ93008 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP9XQ93008 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP9XQ93008 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.09■□□□□ 0.49
USP9XQ93008 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP9XQ93008 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP9XQ93008 KRT18P56-201ENST00000507275 550 ntBASIC18.09■□□□□ 0.49
USP9XQ93008 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.09■□□□□ 0.49
USP9XQ93008 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.09■□□□□ 0.49
USP9XQ93008 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP9XQ93008 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USP9XQ93008 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.08■□□□□ 0.49
USP9XQ93008 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP9XQ93008 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
USP9XQ93008 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USP9XQ93008 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP9XQ93008 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USP9XQ93008 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.08■□□□□ 0.49
USP9XQ93008 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP9XQ93008 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.08■□□□□ 0.49
USP9XQ93008 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
USP9XQ93008 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
USP9XQ93008 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
USP9XQ93008 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.08■□□□□ 0.48
USP9XQ93008 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
USP9XQ93008 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.08■□□□□ 0.48
USP9XQ93008 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP9XQ93008 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP9XQ93008 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP9XQ93008 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.07■□□□□ 0.48
USP9XQ93008 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP9XQ93008 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.07■□□□□ 0.48
USP9XQ93008 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP9XQ93008 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP9XQ93008 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.07■□□□□ 0.48
USP9XQ93008 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
USP9XQ93008 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.07■□□□□ 0.48
USP9XQ93008 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP9XQ93008 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms