Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GCN1Q92616 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.27■□□□□ 0.52
GCN1Q92616 AL845331.1-201ENST00000424978 1190 ntBASIC18.27■□□□□ 0.52
GCN1Q92616 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GCN1Q92616 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.27■□□□□ 0.52
GCN1Q92616 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GCN1Q92616 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GCN1Q92616 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GCN1Q92616 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.27■□□□□ 0.52
GCN1Q92616 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GCN1Q92616 KRT16P5-201ENST00000455284 522 ntBASIC18.27■□□□□ 0.52
GCN1Q92616 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.27■□□□□ 0.52
GCN1Q92616 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.27■□□□□ 0.51
GCN1Q92616 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GCN1Q92616 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GCN1Q92616 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GCN1Q92616 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.26■□□□□ 0.51
GCN1Q92616 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.26■□□□□ 0.51
GCN1Q92616 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.26■□□□□ 0.51
GCN1Q92616 AC116562.2-201ENST00000507042 360 ntBASIC18.26■□□□□ 0.51
GCN1Q92616 AC008175.2-201ENST00000612840 297 ntBASIC18.26■□□□□ 0.51
GCN1Q92616 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
GCN1Q92616 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.26■□□□□ 0.51
GCN1Q92616 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.26■□□□□ 0.51
GCN1Q92616 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
GCN1Q92616 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
GCN1Q92616 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.26■□□□□ 0.51
GCN1Q92616 HTR7P1-201ENST00000538670 1336 ntBASIC18.26■□□□□ 0.51
GCN1Q92616 AC005332.1-201ENST00000577698 1310 ntBASIC18.26■□□□□ 0.51
GCN1Q92616 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
GCN1Q92616 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.26■□□□□ 0.51
GCN1Q92616 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GCN1Q92616 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GCN1Q92616 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
GCN1Q92616 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.26■□□□□ 0.51
GCN1Q92616 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.26■□□□□ 0.51
GCN1Q92616 AC061975.6-201ENST00000579045 1553 ntBASIC18.25■□□□□ 0.51
GCN1Q92616 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GCN1Q92616 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GCN1Q92616 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GCN1Q92616 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
GCN1Q92616 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
GCN1Q92616 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
GCN1Q92616 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
GCN1Q92616 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GCN1Q92616 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.25■□□□□ 0.51
GCN1Q92616 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GCN1Q92616 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.25■□□□□ 0.51
GCN1Q92616 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.25■□□□□ 0.51
GCN1Q92616 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.25■□□□□ 0.51
GCN1Q92616 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
GCN1Q92616 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
GCN1Q92616 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GCN1Q92616 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
GCN1Q92616 TSPY5P-201ENST00000426936 936 ntBASIC18.24■□□□□ 0.51
GCN1Q92616 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GCN1Q92616 AC111152.3-201ENST00000569699 673 ntBASIC18.24■□□□□ 0.51
GCN1Q92616 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.24■□□□□ 0.51
GCN1Q92616 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GCN1Q92616 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
GCN1Q92616 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
GCN1Q92616 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GCN1Q92616 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
GCN1Q92616 TSPY14P-201ENST00000303979 915 ntBASIC18.24■□□□□ 0.51
GCN1Q92616 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GCN1Q92616 KRT18P13-201ENST00000400056 1290 ntBASIC18.24■□□□□ 0.51
GCN1Q92616 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.24■□□□□ 0.51
GCN1Q92616 AC117947.1-201ENST00000427448 529 ntBASIC18.24■□□□□ 0.51
GCN1Q92616 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.24■□□□□ 0.51
GCN1Q92616 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GCN1Q92616 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.24■□□□□ 0.51
GCN1Q92616 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.24■□□□□ 0.51
GCN1Q92616 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GCN1Q92616 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
GCN1Q92616 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GCN1Q92616 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
GCN1Q92616 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GCN1Q92616 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GCN1Q92616 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GCN1Q92616 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
GCN1Q92616 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GCN1Q92616 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GCN1Q92616 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GCN1Q92616 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.23■□□□□ 0.51
GCN1Q92616 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GCN1Q92616 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GCN1Q92616 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GCN1Q92616 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.23■□□□□ 0.51
GCN1Q92616 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GCN1Q92616 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GCN1Q92616 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GCN1Q92616 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.22■□□□□ 0.51
GCN1Q92616 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.22■□□□□ 0.51
GCN1Q92616 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.22■□□□□ 0.51
GCN1Q92616 AC130371.2-201ENST00000619443 611 ntBASIC18.22■□□□□ 0.51
GCN1Q92616 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GCN1Q92616 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GCN1Q92616 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GCN1Q92616 PGM5P4-201ENST00000421970 445 ntBASIC18.22■□□□□ 0.51
GCN1Q92616 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms