Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP3S1Q92572 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3S1Q92572 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
AP3S1Q92572 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
AP3S1Q92572 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
AP3S1Q92572 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
AP3S1Q92572 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP3S1Q92572 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3S1Q92572 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP3S1Q92572 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3S1Q92572 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.11■□□□□ 0.49
AP3S1Q92572 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.11■□□□□ 0.49
AP3S1Q92572 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3S1Q92572 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.11■□□□□ 0.49
AP3S1Q92572 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.11■□□□□ 0.49
AP3S1Q92572 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.11■□□□□ 0.49
AP3S1Q92572 MIR4508-201ENST00000584178 70 ntBASIC18.11■□□□□ 0.49
AP3S1Q92572 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.11■□□□□ 0.49
AP3S1Q92572 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3S1Q92572 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP3S1Q92572 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3S1Q92572 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3S1Q92572 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP3S1Q92572 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP3S1Q92572 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3S1Q92572 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
AP3S1Q92572 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3S1Q92572 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3S1Q92572 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3S1Q92572 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.1■□□□□ 0.49
AP3S1Q92572 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
AP3S1Q92572 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
AP3S1Q92572 RARRES2P2-201ENST00000394842 485 ntBASIC18.1■□□□□ 0.49
AP3S1Q92572 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.1■□□□□ 0.49
AP3S1Q92572 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.1■□□□□ 0.49
AP3S1Q92572 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3S1Q92572 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3S1Q92572 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.1■□□□□ 0.49
AP3S1Q92572 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3S1Q92572 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP3S1Q92572 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3S1Q92572 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3S1Q92572 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP3S1Q92572 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3S1Q92572 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3S1Q92572 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3S1Q92572 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3S1Q92572 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3S1Q92572 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3S1Q92572 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3S1Q92572 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3S1Q92572 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP3S1Q92572 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP3S1Q92572 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3S1Q92572 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.09■□□□□ 0.49
AP3S1Q92572 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3S1Q92572 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP3S1Q92572 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.09■□□□□ 0.49
AP3S1Q92572 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
AP3S1Q92572 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.09■□□□□ 0.49
AP3S1Q92572 AC241377.3-202ENST00000626088 1088 ntBASIC18.09■□□□□ 0.49
AP3S1Q92572 AC241585.3-202ENST00000628937 1088 ntBASIC18.09■□□□□ 0.49
AP3S1Q92572 AC245100.8-202ENST00000629247 1058 ntBASIC18.09■□□□□ 0.49
AP3S1Q92572 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP3S1Q92572 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.09■□□□□ 0.49
AP3S1Q92572 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3S1Q92572 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
AP3S1Q92572 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP3S1Q92572 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3S1Q92572 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.08■□□□□ 0.49
AP3S1Q92572 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP3S1Q92572 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.49
AP3S1Q92572 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
AP3S1Q92572 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
AP3S1Q92572 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP3S1Q92572 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP3S1Q92572 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP3S1Q92572 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.08■□□□□ 0.49
AP3S1Q92572 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP3S1Q92572 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3S1Q92572 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AP3S1Q92572 AC010980.1-201ENST00000587192 1142 ntBASIC18.08■□□□□ 0.48
AP3S1Q92572 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.08■□□□□ 0.48
AP3S1Q92572 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.08■□□□□ 0.48
AP3S1Q92572 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3S1Q92572 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
AP3S1Q92572 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.07■□□□□ 0.48
AP3S1Q92572 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.07■□□□□ 0.48
AP3S1Q92572 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.07■□□□□ 0.48
AP3S1Q92572 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
AP3S1Q92572 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S1Q92572 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
AP3S1Q92572 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S1Q92572 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.07■□□□□ 0.48
AP3S1Q92572 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.07■□□□□ 0.48
AP3S1Q92572 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S1Q92572 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.07■□□□□ 0.48
AP3S1Q92572 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S1Q92572 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S1Q92572 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms