Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 AC034268.1-201ENST00000441047 882 ntBASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 AC121338.2-201ENST00000622535 1744 ntBASIC18.02■□□□□ 0.48
RAB40AQ8WXH6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RAB40AQ8WXH6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAB40AQ8WXH6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.02■□□□□ 0.47
RAB40AQ8WXH6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAB40AQ8WXH6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAB40AQ8WXH6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
RAB40AQ8WXH6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40AQ8WXH6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40AQ8WXH6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18■□□□□ 0.47
RAB40AQ8WXH6 AC007225.1-201ENST00000566331 1836 ntBASIC18■□□□□ 0.47
RAB40AQ8WXH6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40AQ8WXH6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40AQ8WXH6 AP004607.7-201ENST00000527152 1677 ntBASIC18■□□□□ 0.47
RAB40AQ8WXH6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18■□□□□ 0.47
RAB40AQ8WXH6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40AQ8WXH6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40AQ8WXH6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18■□□□□ 0.47
RAB40AQ8WXH6 NT5C3AP1-201ENST00000394500 1012 ntBASIC18■□□□□ 0.47
RAB40AQ8WXH6 AL162430.1-201ENST00000480705 870 ntBASIC18■□□□□ 0.47
RAB40AQ8WXH6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40AQ8WXH6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18■□□□□ 0.47
RAB40AQ8WXH6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18■□□□□ 0.47
RAB40AQ8WXH6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18■□□□□ 0.47
RAB40AQ8WXH6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40AQ8WXH6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAB40AQ8WXH6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18■□□□□ 0.47
RAB40AQ8WXH6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RAB40AQ8WXH6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40AQ8WXH6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40AQ8WXH6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
RAB40AQ8WXH6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18■□□□□ 0.47
RAB40AQ8WXH6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40AQ8WXH6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
RAB40AQ8WXH6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms