Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCG3Q8WXD2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SCG3Q8WXD2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCG3Q8WXD2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCG3Q8WXD2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCG3Q8WXD2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.99■□□□□ 0.95
SCG3Q8WXD2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCG3Q8WXD2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCG3Q8WXD2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCG3Q8WXD2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.99■□□□□ 0.95
SCG3Q8WXD2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCG3Q8WXD2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCG3Q8WXD2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SCG3Q8WXD2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.99■□□□□ 0.95
SCG3Q8WXD2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCG3Q8WXD2 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.99■□□□□ 0.95
SCG3Q8WXD2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SCG3Q8WXD2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCG3Q8WXD2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCG3Q8WXD2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCG3Q8WXD2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SCG3Q8WXD2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SCG3Q8WXD2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCG3Q8WXD2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCG3Q8WXD2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCG3Q8WXD2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
SCG3Q8WXD2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCG3Q8WXD2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCG3Q8WXD2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.98■□□□□ 0.95
SCG3Q8WXD2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCG3Q8WXD2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCG3Q8WXD2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.98■□□□□ 0.95
SCG3Q8WXD2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCG3Q8WXD2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SCG3Q8WXD2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCG3Q8WXD2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCG3Q8WXD2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SCG3Q8WXD2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG3Q8WXD2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SCG3Q8WXD2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SCG3Q8WXD2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SCG3Q8WXD2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG3Q8WXD2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG3Q8WXD2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.97■□□□□ 0.95
SCG3Q8WXD2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCG3Q8WXD2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG3Q8WXD2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCG3Q8WXD2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCG3Q8WXD2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG3Q8WXD2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG3Q8WXD2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.97■□□□□ 0.95
SCG3Q8WXD2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG3Q8WXD2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG3Q8WXD2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.96■□□□□ 0.95
SCG3Q8WXD2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SCG3Q8WXD2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCG3Q8WXD2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCG3Q8WXD2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SCG3Q8WXD2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCG3Q8WXD2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCG3Q8WXD2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.96■□□□□ 0.95
SCG3Q8WXD2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCG3Q8WXD2 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.96■□□□□ 0.95
SCG3Q8WXD2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCG3Q8WXD2 EEF1DP3-203ENST00000566025 782 ntBASIC20.96■□□□□ 0.95
SCG3Q8WXD2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCG3Q8WXD2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.96■□□□□ 0.95
SCG3Q8WXD2 AP001160.3-201ENST00000601484 763 ntBASIC20.96■□□□□ 0.95
SCG3Q8WXD2 AC053503.5-201ENST00000601508 636 ntBASIC20.96■□□□□ 0.95
SCG3Q8WXD2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCG3Q8WXD2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.96■□□□□ 0.95
SCG3Q8WXD2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SCG3Q8WXD2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCG3Q8WXD2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SCG3Q8WXD2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCG3Q8WXD2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.95■□□□□ 0.94
SCG3Q8WXD2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCG3Q8WXD2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCG3Q8WXD2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCG3Q8WXD2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCG3Q8WXD2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCG3Q8WXD2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCG3Q8WXD2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCG3Q8WXD2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SCG3Q8WXD2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
SCG3Q8WXD2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCG3Q8WXD2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCG3Q8WXD2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCG3Q8WXD2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.94■□□□□ 0.94
SCG3Q8WXD2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCG3Q8WXD2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCG3Q8WXD2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCG3Q8WXD2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCG3Q8WXD2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCG3Q8WXD2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCG3Q8WXD2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.94■□□□□ 0.94
SCG3Q8WXD2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.94■□□□□ 0.94
SCG3Q8WXD2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCG3Q8WXD2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCG3Q8WXD2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms