Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.49■■□□□ 1.19
TMEM40Q8WWA1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
TMEM40Q8WWA1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
TMEM40Q8WWA1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.49■■□□□ 1.19
TMEM40Q8WWA1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.48■■□□□ 1.19
TMEM40Q8WWA1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMEM40Q8WWA1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TMEM40Q8WWA1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMEM40Q8WWA1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TMEM40Q8WWA1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TMEM40Q8WWA1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMEM40Q8WWA1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.48■■□□□ 1.19
TMEM40Q8WWA1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.48■■□□□ 1.19
TMEM40Q8WWA1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMEM40Q8WWA1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
TMEM40Q8WWA1 SOX15-203ENST00000570788 1093 ntBASIC22.48■■□□□ 1.19
TMEM40Q8WWA1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMEM40Q8WWA1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TMEM40Q8WWA1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.48■■□□□ 1.19
TMEM40Q8WWA1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMEM40Q8WWA1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 C2orf69P4-201ENST00000565394 541 ntBASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 AC244015.2-201ENST00000616358 1861 ntBASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
TMEM40Q8WWA1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM40Q8WWA1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.46■■□□□ 1.19
TMEM40Q8WWA1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM40Q8WWA1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM40Q8WWA1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.46■■□□□ 1.19
TMEM40Q8WWA1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.46■■□□□ 1.19
TMEM40Q8WWA1 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.46■■□□□ 1.19
TMEM40Q8WWA1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.46■■□□□ 1.19
TMEM40Q8WWA1 AL359736.2-201ENST00000621992 437 ntBASIC22.46■■□□□ 1.19
TMEM40Q8WWA1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM40Q8WWA1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM40Q8WWA1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.46■■□□□ 1.19
TMEM40Q8WWA1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.46■■□□□ 1.19
TMEM40Q8WWA1 FBXW4P1-201ENST00000426721 2239 ntBASIC22.46■■□□□ 1.19
TMEM40Q8WWA1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM40Q8WWA1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
TMEM40Q8WWA1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
TMEM40Q8WWA1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM40Q8WWA1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.19
TMEM40Q8WWA1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
TMEM40Q8WWA1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
TMEM40Q8WWA1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMEM40Q8WWA1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMEM40Q8WWA1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMEM40Q8WWA1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.45■■□□□ 1.18
TMEM40Q8WWA1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
TMEM40Q8WWA1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.45■■□□□ 1.18
TMEM40Q8WWA1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMEM40Q8WWA1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.45■■□□□ 1.18
TMEM40Q8WWA1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.45■■□□□ 1.18
TMEM40Q8WWA1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.44■■□□□ 1.18
TMEM40Q8WWA1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM40Q8WWA1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM40Q8WWA1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
TMEM40Q8WWA1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM40Q8WWA1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM40Q8WWA1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
TMEM40Q8WWA1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
TMEM40Q8WWA1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM40Q8WWA1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.44■■□□□ 1.18
TMEM40Q8WWA1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM40Q8WWA1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM40Q8WWA1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM40Q8WWA1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.44■■□□□ 1.18
TMEM40Q8WWA1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.44■■□□□ 1.18
TMEM40Q8WWA1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM40Q8WWA1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms