Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.27■■□□□ 1.64
SNED1Q8TER0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC25.27■■□□□ 1.64
SNED1Q8TER0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
SNED1Q8TER0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC25.27■■□□□ 1.64
SNED1Q8TER0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SNED1Q8TER0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SNED1Q8TER0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SNED1Q8TER0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
SNED1Q8TER0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SNED1Q8TER0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SNED1Q8TER0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC25.26■■□□□ 1.63
SNED1Q8TER0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SNED1Q8TER0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SNED1Q8TER0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC25.26■■□□□ 1.63
SNED1Q8TER0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SNED1Q8TER0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
SNED1Q8TER0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.26■■□□□ 1.63
SNED1Q8TER0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SNED1Q8TER0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.26■■□□□ 1.63
SNED1Q8TER0 AC005829.2-201ENST00000571422 1056 ntBASIC25.26■■□□□ 1.63
SNED1Q8TER0 MIR4785-201ENST00000585005 73 ntBASIC25.26■■□□□ 1.63
SNED1Q8TER0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SNED1Q8TER0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SNED1Q8TER0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SNED1Q8TER0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SNED1Q8TER0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SNED1Q8TER0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SNED1Q8TER0 KRT17P2-201ENST00000300992 1314 ntBASIC25.25■■□□□ 1.63
SNED1Q8TER0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
SNED1Q8TER0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SNED1Q8TER0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SNED1Q8TER0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SNED1Q8TER0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SNED1Q8TER0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC25.25■■□□□ 1.63
SNED1Q8TER0 AC120498.8-201ENST00000614275 531 ntBASIC25.25■■□□□ 1.63
SNED1Q8TER0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
SNED1Q8TER0 FAM99A-202ENST00000538190 1989 ntBASIC25.25■■□□□ 1.63
SNED1Q8TER0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SNED1Q8TER0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC25.25■■□□□ 1.63
SNED1Q8TER0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SNED1Q8TER0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC25.24■■□□□ 1.63
SNED1Q8TER0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SNED1Q8TER0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SNED1Q8TER0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
SNED1Q8TER0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SNED1Q8TER0 RARRES2P10-201ENST00000564312 460 ntBASIC25.24■■□□□ 1.63
SNED1Q8TER0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC25.24■■□□□ 1.63
SNED1Q8TER0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC25.24■■□□□ 1.63
SNED1Q8TER0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SNED1Q8TER0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SNED1Q8TER0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.24■■□□□ 1.63
SNED1Q8TER0 AC116050.2-201ENST00000612102 1779 ntBASIC25.24■■□□□ 1.63
SNED1Q8TER0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SNED1Q8TER0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SNED1Q8TER0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SNED1Q8TER0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SNED1Q8TER0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SNED1Q8TER0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC25.23■■□□□ 1.63
SNED1Q8TER0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC25.23■■□□□ 1.63
SNED1Q8TER0 AC110285.5-201ENST00000611501 352 ntBASIC25.23■■□□□ 1.63
SNED1Q8TER0 AC133561.5-201ENST00000635547 218 ntBASIC25.23■■□□□ 1.63
SNED1Q8TER0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.23■■□□□ 1.63
SNED1Q8TER0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SNED1Q8TER0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.23■■□□□ 1.63
SNED1Q8TER0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SNED1Q8TER0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SNED1Q8TER0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SNED1Q8TER0 KRASP1-201ENST00000407852 552 ntBASIC25.22■■□□□ 1.63
SNED1Q8TER0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
SNED1Q8TER0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
SNED1Q8TER0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SNED1Q8TER0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
SNED1Q8TER0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC25.22■■□□□ 1.63
SNED1Q8TER0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.22■■□□□ 1.63
SNED1Q8TER0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
SNED1Q8TER0 PENK-204ENST00000518770 863 ntTSL 2 BASIC25.21■■□□□ 1.63
SNED1Q8TER0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC25.21■■□□□ 1.63
SNED1Q8TER0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC25.21■■□□□ 1.63
SNED1Q8TER0 TK2-213ENST00000563369 882 ntTSL 5 BASIC25.21■■□□□ 1.63
SNED1Q8TER0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC25.21■■□□□ 1.63
SNED1Q8TER0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC25.21■■□□□ 1.63
SNED1Q8TER0 AL353708.3-201ENST00000610272 989 ntBASIC25.21■■□□□ 1.63
SNED1Q8TER0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SNED1Q8TER0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.21■■□□□ 1.63
SNED1Q8TER0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
SNED1Q8TER0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SNED1Q8TER0 AL135905.2-201ENST00000584934 1404 ntBASIC25.21■■□□□ 1.63
SNED1Q8TER0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SNED1Q8TER0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SNED1Q8TER0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
SNED1Q8TER0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SNED1Q8TER0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC25.21■■□□□ 1.63
SNED1Q8TER0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SNED1Q8TER0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
SNED1Q8TER0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
SNED1Q8TER0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC25.2■■□□□ 1.63
SNED1Q8TER0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.63
SNED1Q8TER0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.2■■□□□ 1.63
SNED1Q8TER0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC25.2■■□□□ 1.62
SNED1Q8TER0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms