Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.03□□□□□ -0.16
ALMS1Q8TCU4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ALMS1Q8TCU4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ALMS1Q8TCU4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ALMS1Q8TCU4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ALMS1Q8TCU4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ALMS1Q8TCU4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ALMS1Q8TCU4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.03□□□□□ -0.16
ALMS1Q8TCU4 NFE2L3P1-201ENST00000588207 1959 ntBASIC14.03□□□□□ -0.16
ALMS1Q8TCU4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.02□□□□□ -0.16
ALMS1Q8TCU4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.02□□□□□ -0.16
ALMS1Q8TCU4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
ALMS1Q8TCU4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ALMS1Q8TCU4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ALMS1Q8TCU4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ALMS1Q8TCU4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.02□□□□□ -0.17
ALMS1Q8TCU4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ALMS1Q8TCU4 C11orf96-202ENST00000528572 1834 ntBASIC14.02□□□□□ -0.17
ALMS1Q8TCU4 AC124283.5-201ENST00000624661 1809 ntBASIC14.02□□□□□ -0.17
ALMS1Q8TCU4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ALMS1Q8TCU4 AC068473.5-201ENST00000616428 2072 ntBASIC14.02□□□□□ -0.17
ALMS1Q8TCU4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ALMS1Q8TCU4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
ALMS1Q8TCU4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.02□□□□□ -0.17
ALMS1Q8TCU4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.02□□□□□ -0.17
ALMS1Q8TCU4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.02□□□□□ -0.17
ALMS1Q8TCU4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ALMS1Q8TCU4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC14.02□□□□□ -0.17
ALMS1Q8TCU4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 AC073195.1-201ENST00000607241 877 ntBASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 CRYGFP-201ENST00000418459 633 ntBASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 AL390955.1-201ENST00000428694 934 ntBASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 KRT16P5-201ENST00000455284 522 ntBASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 AC110285.5-201ENST00000611501 352 ntBASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ALMS1Q8TCU4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14□□□□□ -0.17
ALMS1Q8TCU4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14□□□□□ -0.17
ALMS1Q8TCU4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC14□□□□□ -0.17
ALMS1Q8TCU4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ALMS1Q8TCU4 AL353807.1-201ENST00000427475 662 ntBASIC14□□□□□ -0.17
ALMS1Q8TCU4 AL137013.1-201ENST00000432946 1228 ntBASIC14□□□□□ -0.17
ALMS1Q8TCU4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14□□□□□ -0.17
ALMS1Q8TCU4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14□□□□□ -0.17
ALMS1Q8TCU4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14□□□□□ -0.17
ALMS1Q8TCU4 AC005363.2-201ENST00000618631 242 ntBASIC14□□□□□ -0.17
ALMS1Q8TCU4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC14□□□□□ -0.17
ALMS1Q8TCU4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ALMS1Q8TCU4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14□□□□□ -0.17
ALMS1Q8TCU4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14□□□□□ -0.17
ALMS1Q8TCU4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14□□□□□ -0.17
ALMS1Q8TCU4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14□□□□□ -0.17
ALMS1Q8TCU4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ALMS1Q8TCU4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ALMS1Q8TCU4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC14□□□□□ -0.17
ALMS1Q8TCU4 KRT18P22-201ENST00000402024 1347 ntBASIC14□□□□□ -0.17
ALMS1Q8TCU4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ALMS1Q8TCU4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14□□□□□ -0.17
ALMS1Q8TCU4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14□□□□□ -0.17
ALMS1Q8TCU4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ALMS1Q8TCU4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC13.99□□□□□ -0.17
ALMS1Q8TCU4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ALMS1Q8TCU4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ALMS1Q8TCU4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ALMS1Q8TCU4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ALMS1Q8TCU4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ALMS1Q8TCU4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ALMS1Q8TCU4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ALMS1Q8TCU4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.99□□□□□ -0.17
ALMS1Q8TCU4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.99□□□□□ -0.17
ALMS1Q8TCU4 AC139530.1-201ENST00000575312 1977 ntBASIC13.99□□□□□ -0.17
ALMS1Q8TCU4 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.99□□□□□ -0.17
ALMS1Q8TCU4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.99□□□□□ -0.17
ALMS1Q8TCU4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ALMS1Q8TCU4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC13.99□□□□□ -0.17
ALMS1Q8TCU4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms