Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.8■■□□□ 1.08
UBA3Q8TBC4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
UBA3Q8TBC4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.8■■□□□ 1.08
UBA3Q8TBC4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBA3Q8TBC4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.8■■□□□ 1.08
UBA3Q8TBC4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBA3Q8TBC4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBA3Q8TBC4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UBA3Q8TBC4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.8■■□□□ 1.08
UBA3Q8TBC4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
UBA3Q8TBC4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBA3Q8TBC4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 AC006128.1-201ENST00000624704 1661 ntBASIC21.79■■□□□ 1.08
UBA3Q8TBC4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
UBA3Q8TBC4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBA3Q8TBC4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
UBA3Q8TBC4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.78■■□□□ 1.08
UBA3Q8TBC4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.78■■□□□ 1.08
UBA3Q8TBC4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.78■■□□□ 1.08
UBA3Q8TBC4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.78■■□□□ 1.08
UBA3Q8TBC4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBA3Q8TBC4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
UBA3Q8TBC4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.78■■□□□ 1.08
UBA3Q8TBC4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.78■■□□□ 1.08
UBA3Q8TBC4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UBA3Q8TBC4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.78■■□□□ 1.08
UBA3Q8TBC4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.78■■□□□ 1.08
UBA3Q8TBC4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBA3Q8TBC4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBA3Q8TBC4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
UBA3Q8TBC4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UBA3Q8TBC4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBA3Q8TBC4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.77■■□□□ 1.08
UBA3Q8TBC4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBA3Q8TBC4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBA3Q8TBC4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBA3Q8TBC4 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.77■■□□□ 1.08
UBA3Q8TBC4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.77■■□□□ 1.08
UBA3Q8TBC4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBA3Q8TBC4 AC006970.2-201ENST00000450065 779 ntBASIC21.77■■□□□ 1.08
UBA3Q8TBC4 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.77■■□□□ 1.08
UBA3Q8TBC4 RARRES2P4-201ENST00000514074 484 ntBASIC21.77■■□□□ 1.08
UBA3Q8TBC4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
UBA3Q8TBC4 AL162412.1-201ENST00000567129 965 ntBASIC21.77■■□□□ 1.08
UBA3Q8TBC4 FAM21FP-204ENST00000608637 956 ntBASIC21.77■■□□□ 1.08
UBA3Q8TBC4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBA3Q8TBC4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBA3Q8TBC4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.77■■□□□ 1.07
UBA3Q8TBC4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBA3Q8TBC4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBA3Q8TBC4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.76■■□□□ 1.07
UBA3Q8TBC4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
UBA3Q8TBC4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.76■■□□□ 1.07
UBA3Q8TBC4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
UBA3Q8TBC4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBA3Q8TBC4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
UBA3Q8TBC4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.75■■□□□ 1.07
UBA3Q8TBC4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
UBA3Q8TBC4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBA3Q8TBC4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
UBA3Q8TBC4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
UBA3Q8TBC4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBA3Q8TBC4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBA3Q8TBC4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBA3Q8TBC4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBA3Q8TBC4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBA3Q8TBC4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
UBA3Q8TBC4 AC093787.1-201ENST00000450396 207 ntBASIC21.75■■□□□ 1.07
UBA3Q8TBC4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.75■■□□□ 1.07
UBA3Q8TBC4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
UBA3Q8TBC4 AC069236.1-201ENST00000604339 616 ntBASIC21.75■■□□□ 1.07
UBA3Q8TBC4 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.75■■□□□ 1.07
UBA3Q8TBC4 AC008694.1-202ENST00000636953 945 ntBASIC21.75■■□□□ 1.07
UBA3Q8TBC4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
UBA3Q8TBC4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UBA3Q8TBC4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBA3Q8TBC4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.74■■□□□ 1.07
UBA3Q8TBC4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
UBA3Q8TBC4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBA3Q8TBC4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.74■■□□□ 1.07
UBA3Q8TBC4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms