Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CYP21A1P-202ENST00000354927 1481 ntBASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 PRKY-204ENST00000533551 1019 ntBASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNIP1Q8TAD8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNIP1Q8TAD8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNIP1Q8TAD8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.44■□□□□ 0.7
SNIP1Q8TAD8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNIP1Q8TAD8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.44■□□□□ 0.7
SNIP1Q8TAD8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNIP1Q8TAD8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNIP1Q8TAD8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SNIP1Q8TAD8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.44■□□□□ 0.7
SNIP1Q8TAD8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNIP1Q8TAD8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SNIP1Q8TAD8 RN7SL850P-201ENST00000579959 291 ntBASIC19.44■□□□□ 0.7
SNIP1Q8TAD8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNIP1Q8TAD8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNIP1Q8TAD8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNIP1Q8TAD8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNIP1Q8TAD8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNIP1Q8TAD8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 AC003102.1-202ENST00000563394 1796 ntBASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 KRASP1-201ENST00000407852 552 ntBASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNIP1Q8TAD8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 ARMC10P1-201ENST00000313754 855 ntBASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 AC120498.8-201ENST00000614275 531 ntBASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 AL590326.2-201ENST00000625139 305 ntBASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNIP1Q8TAD8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 AL353708.3-201ENST00000610272 989 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms