Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.08■□□□□ 0.16
LINC01006Q8NI28 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LINC01006Q8NI28 SNORA78-201ENST00000459373 127 ntBASIC16.08■□□□□ 0.16
LINC01006Q8NI28 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.08■□□□□ 0.16
LINC01006Q8NI28 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.08■□□□□ 0.16
LINC01006Q8NI28 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.08■□□□□ 0.16
LINC01006Q8NI28 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01006Q8NI28 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.08■□□□□ 0.16
LINC01006Q8NI28 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LINC01006Q8NI28 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.08■□□□□ 0.16
LINC01006Q8NI28 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.08■□□□□ 0.16
LINC01006Q8NI28 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01006Q8NI28 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LINC01006Q8NI28 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01006Q8NI28 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.08■□□□□ 0.16
LINC01006Q8NI28 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.08■□□□□ 0.16
LINC01006Q8NI28 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01006Q8NI28 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01006Q8NI28 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.07■□□□□ 0.16
LINC01006Q8NI28 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 MTDHP1-201ENST00000605323 784 ntBASIC16.06■□□□□ 0.16
LINC01006Q8NI28 AC073912.3-201ENST00000624414 853 ntBASIC16.06■□□□□ 0.16
LINC01006Q8NI28 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.06■□□□□ 0.16
LINC01006Q8NI28 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01006Q8NI28 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.05■□□□□ 0.16
LINC01006Q8NI28 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 AC005829.2-201ENST00000571422 1056 ntBASIC16.05■□□□□ 0.16
LINC01006Q8NI28 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 AC120498.8-201ENST00000614275 531 ntBASIC16.05■□□□□ 0.16
LINC01006Q8NI28 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LINC01006Q8NI28 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01006Q8NI28 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01006Q8NI28 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01006Q8NI28 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
LINC01006Q8NI28 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms