Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.3■□□□□ 0.84
EFCAB3Q8N7B9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.3■□□□□ 0.84
EFCAB3Q8N7B9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.3■□□□□ 0.84
EFCAB3Q8N7B9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
EFCAB3Q8N7B9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EFCAB3Q8N7B9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EFCAB3Q8N7B9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.3■□□□□ 0.84
EFCAB3Q8N7B9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
EFCAB3Q8N7B9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
EFCAB3Q8N7B9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
EFCAB3Q8N7B9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EFCAB3Q8N7B9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EFCAB3Q8N7B9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB3Q8N7B9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.29■□□□□ 0.84
EFCAB3Q8N7B9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
EFCAB3Q8N7B9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB3Q8N7B9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB3Q8N7B9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB3Q8N7B9 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.29■□□□□ 0.84
EFCAB3Q8N7B9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.29■□□□□ 0.84
EFCAB3Q8N7B9 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.29■□□□□ 0.84
EFCAB3Q8N7B9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB3Q8N7B9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB3Q8N7B9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.29■□□□□ 0.84
EFCAB3Q8N7B9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
EFCAB3Q8N7B9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.29■□□□□ 0.84
EFCAB3Q8N7B9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCAB3Q8N7B9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCAB3Q8N7B9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCAB3Q8N7B9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EFCAB3Q8N7B9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
EFCAB3Q8N7B9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
EFCAB3Q8N7B9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
EFCAB3Q8N7B9 AC137761.2-201ENST00000561729 223 ntBASIC20.28■□□□□ 0.84
EFCAB3Q8N7B9 AC145350.3-201ENST00000569033 163 ntBASIC20.28■□□□□ 0.84
EFCAB3Q8N7B9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.28■□□□□ 0.84
EFCAB3Q8N7B9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.28■□□□□ 0.84
EFCAB3Q8N7B9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
EFCAB3Q8N7B9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.28■□□□□ 0.84
EFCAB3Q8N7B9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EFCAB3Q8N7B9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCAB3Q8N7B9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCAB3Q8N7B9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCAB3Q8N7B9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EFCAB3Q8N7B9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFCAB3Q8N7B9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFCAB3Q8N7B9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EFCAB3Q8N7B9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EFCAB3Q8N7B9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.27■□□□□ 0.84
EFCAB3Q8N7B9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFCAB3Q8N7B9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFCAB3Q8N7B9 RN7SL832P-201ENST00000607781 1756 ntBASIC20.27■□□□□ 0.84
EFCAB3Q8N7B9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.27■□□□□ 0.84
EFCAB3Q8N7B9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFCAB3Q8N7B9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.27■□□□□ 0.84
EFCAB3Q8N7B9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
EFCAB3Q8N7B9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFCAB3Q8N7B9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFCAB3Q8N7B9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFCAB3Q8N7B9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EFCAB3Q8N7B9 BX005040.4-201ENST00000637145 1518 ntBASIC20.27■□□□□ 0.83
EFCAB3Q8N7B9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.27■□□□□ 0.83
EFCAB3Q8N7B9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
EFCAB3Q8N7B9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCAB3Q8N7B9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCAB3Q8N7B9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCAB3Q8N7B9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
EFCAB3Q8N7B9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
EFCAB3Q8N7B9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCAB3Q8N7B9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCAB3Q8N7B9 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC20.26■□□□□ 0.83
EFCAB3Q8N7B9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EFCAB3Q8N7B9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.26■□□□□ 0.83
EFCAB3Q8N7B9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCAB3Q8N7B9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
EFCAB3Q8N7B9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCAB3Q8N7B9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCAB3Q8N7B9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.26■□□□□ 0.83
EFCAB3Q8N7B9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCAB3Q8N7B9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.26■□□□□ 0.83
EFCAB3Q8N7B9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 AP005212.1-201ENST00000581547 1997 ntBASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 AC090142.2-201ENST00000483263 416 ntBASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
EFCAB3Q8N7B9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms