Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC9CQ8N5M4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 AC091799.1-201ENST00000422823 811 ntBASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 MIR5787-201ENST00000611784 55 ntBASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TTC9CQ8N5M4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 AC137761.2-201ENST00000561729 223 ntBASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 AC145350.3-201ENST00000569033 163 ntBASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 AC007225.1-201ENST00000566331 1836 ntBASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TTC9CQ8N5M4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TTC9CQ8N5M4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TTC9CQ8N5M4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TTC9CQ8N5M4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
TTC9CQ8N5M4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 RNF165-205ENST00000588679 2904 ntBASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TTC9CQ8N5M4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms