Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 AC121338.2-201ENST00000622535 1744 ntBASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 MIR572-201ENST00000384983 95 ntBASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 AC026271.2-201ENST00000428091 497 ntBASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 AC010525.1-201ENST00000585559 441 ntBASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 AC092666.2-201ENST00000613287 246 ntBASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 AC027702.1-201ENST00000563810 1770 ntBASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 AC020907.5-201ENST00000624372 1936 ntBASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.05■□□□□ 0.64
DEPDC4Q8N2C3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DEPDC4Q8N2C3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
DEPDC4Q8N2C3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.04■□□□□ 0.64
DEPDC4Q8N2C3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DEPDC4Q8N2C3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
DEPDC4Q8N2C3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.04■□□□□ 0.64
DEPDC4Q8N2C3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.04■□□□□ 0.64
DEPDC4Q8N2C3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.04■□□□□ 0.64
DEPDC4Q8N2C3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
DEPDC4Q8N2C3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.04■□□□□ 0.64
DEPDC4Q8N2C3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.04■□□□□ 0.64
DEPDC4Q8N2C3 AL354811.1-201ENST00000610286 706 ntBASIC19.04■□□□□ 0.64
DEPDC4Q8N2C3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.04■□□□□ 0.64
DEPDC4Q8N2C3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.04■□□□□ 0.64
DEPDC4Q8N2C3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DEPDC4Q8N2C3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DEPDC4Q8N2C3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
DEPDC4Q8N2C3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
DEPDC4Q8N2C3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.03■□□□□ 0.64
DEPDC4Q8N2C3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DEPDC4Q8N2C3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.03■□□□□ 0.64
DEPDC4Q8N2C3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DEPDC4Q8N2C3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
DEPDC4Q8N2C3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DEPDC4Q8N2C3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.03■□□□□ 0.64
DEPDC4Q8N2C3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.03■□□□□ 0.64
DEPDC4Q8N2C3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DEPDC4Q8N2C3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
DEPDC4Q8N2C3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
DEPDC4Q8N2C3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.03■□□□□ 0.64
DEPDC4Q8N2C3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DEPDC4Q8N2C3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
DEPDC4Q8N2C3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
DEPDC4Q8N2C3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DEPDC4Q8N2C3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DEPDC4Q8N2C3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DEPDC4Q8N2C3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DEPDC4Q8N2C3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.02■□□□□ 0.63
DEPDC4Q8N2C3 AFG3L1P-217ENST00000557444 2447 ntBASIC19.02■□□□□ 0.63
DEPDC4Q8N2C3 AC007225.1-201ENST00000566331 1836 ntBASIC19.02■□□□□ 0.63
DEPDC4Q8N2C3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
DEPDC4Q8N2C3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
DEPDC4Q8N2C3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.01■□□□□ 0.63
DEPDC4Q8N2C3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DEPDC4Q8N2C3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.01■□□□□ 0.63
DEPDC4Q8N2C3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.01■□□□□ 0.63
DEPDC4Q8N2C3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DEPDC4Q8N2C3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DEPDC4Q8N2C3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms