Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 AC027682.1-201ENST00000562846 899 ntBASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LINC01561Q8N1V8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 AL136116.3-201ENST00000402907 1138 ntBASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 AL136162.1-201ENST00000607711 1078 ntBASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 AC135279.3-201ENST00000610945 1311 ntBASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01561Q8N1V8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 AC099778.1-201ENST00000568593 1911 ntBASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 TSPY26P-201ENST00000476365 1326 ntBASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 GRAMD4P2-201ENST00000423297 1097 ntBASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 AC024257.2-201ENST00000549699 147 ntBASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
LINC01561Q8N1V8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 KRT16P2-201ENST00000414673 1423 ntBASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 AC245052.3-201ENST00000450182 901 ntBASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms